X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP8.52953M NaCl,100mM Tris, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
2.3247.07

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 30.645α = 90
b = 68.591β = 90
c = 117.592γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-rayCCDADSC QUANTUM 315r2009-05-28MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 5.0.30.976ALS5.0.3

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.2495099.5698256982511
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.2491.2792.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.2492065816349899.330.153290.152390.16993RANDOM17.593
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.33-0.280.61
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.569
r_dihedral_angle_4_deg16.782
r_dihedral_angle_3_deg12.432
r_dihedral_angle_1_deg4.2
r_scangle_it2.585
r_mcangle_it1.777
r_scbond_it1.741
r_angle_refined_deg1.259
r_mcbond_it1.135
r_angle_other_deg0.841
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg32.569
r_dihedral_angle_4_deg16.782
r_dihedral_angle_3_deg12.432
r_dihedral_angle_1_deg4.2
r_scangle_it2.585
r_mcangle_it1.777
r_scbond_it1.741
r_angle_refined_deg1.259
r_mcbond_it1.135
r_angle_other_deg0.841
r_mcbond_other0.288
r_symmetry_hbond_refined0.253
r_symmetry_vdw_other0.248
r_nbd_refined0.234
r_nbtor_refined0.204
r_xyhbond_nbd_other0.185
r_nbd_other0.183
r_xyhbond_nbd_refined0.147
r_nbtor_other0.084
r_chiral_restr0.078
r_symmetry_vdw_refined0.055
r_bond_refined_d0.008
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1526
Nucleic Acid Atoms
Solvent Atoms382
Heterogen Atoms78

Software

Software
Software NamePurpose
HKL-2000data collection
MOLREPphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling