X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.3547.71

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 50.282α = 90
b = 91.239β = 112.87
c = 59.589γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSPRING-8 BEAMLINE BL26B20.8000SPring-8BL26B2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.95098.738421

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.917.636449195198.650.153660.152030.18399RANDOM17.989
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.270.8-0.230.58
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.701
r_dihedral_angle_4_deg13.913
r_dihedral_angle_3_deg12.17
r_dihedral_angle_1_deg6.192
r_scangle_it2.135
r_scbond_it1.305
r_angle_refined_deg1.154
r_mcangle_it0.823
r_angle_other_deg0.791
r_mcbond_it0.439
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.701
r_dihedral_angle_4_deg13.913
r_dihedral_angle_3_deg12.17
r_dihedral_angle_1_deg6.192
r_scangle_it2.135
r_scbond_it1.305
r_angle_refined_deg1.154
r_mcangle_it0.823
r_angle_other_deg0.791
r_mcbond_it0.439
r_mcbond_other0.085
r_chiral_restr0.064
r_bond_refined_d0.007
r_gen_planes_refined0.004
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3579
Nucleic Acid Atoms
Solvent Atoms415
Heterogen Atoms19

Software

Software
Software NamePurpose
REFMACrefinement