4A0U

Structure of the carboxy-terminal domain of bacteriophage T7 fibre gp17 containing residues 371-553, C2221 crystal form.


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1710 MM TRIS-HCL, 0.2 M AMMONIUM CITRATE (PH 7.0), 20 % (W/V) POLY-ETHYLENE GLYCOL 3350.
Crystal Properties
Matthews coefficientSolvent content
2.8160

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 68.32α = 90
b = 145.56β = 90
c = 172.05γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARMOSAIC 225 mm CCDBENT COLLIMATING MIRROR AND TOROID2011-06-23MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE BM14ESRFBM14

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
122099.90.163.75823619.41
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
122.111000.342.13.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 4A0T219.955592222731000.151350.149460.19675THIN SHELLS19.67
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.631.27-0.64
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.034
r_dihedral_angle_4_deg13.247
r_dihedral_angle_3_deg10.882
r_dihedral_angle_1_deg7.316
r_scangle_it3.384
r_scbond_it2.167
r_angle_refined_deg1.37
r_mcangle_it1.195
r_mcbond_it0.678
r_nbtor_refined0.304
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.034
r_dihedral_angle_4_deg13.247
r_dihedral_angle_3_deg10.882
r_dihedral_angle_1_deg7.316
r_scangle_it3.384
r_scbond_it2.167
r_angle_refined_deg1.37
r_mcangle_it1.195
r_mcbond_it0.678
r_nbtor_refined0.304
r_nbd_refined0.187
r_symmetry_hbond_refined0.181
r_symmetry_vdw_refined0.171
r_xyhbond_nbd_refined0.134
r_chiral_restr0.1
r_bond_refined_d0.015
r_gen_planes_refined0.006
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4348
Nucleic Acid Atoms
Solvent Atoms910
Heterogen Atoms8

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
MOLREPphasing