3MK2

Placental alkaline phosphatase complexed with Phe


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.5451.49

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 87.791α = 90
b = 114.944β = 90
c = 106.341γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.8969.8440824217498.60.1250.1230.163RANDOM22.07
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.320.82-0.5
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.901
r_dihedral_angle_4_deg15.967
r_dihedral_angle_3_deg12.526
r_dihedral_angle_1_deg5.974
r_scangle_it4.087
r_scbond_it2.659
r_mcangle_it1.553
r_angle_refined_deg1.272
r_mcbond_it0.996
r_nbtor_refined0.312
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.901
r_dihedral_angle_4_deg15.967
r_dihedral_angle_3_deg12.526
r_dihedral_angle_1_deg5.974
r_scangle_it4.087
r_scbond_it2.659
r_mcangle_it1.553
r_angle_refined_deg1.272
r_mcbond_it0.996
r_nbtor_refined0.312
r_nbd_refined0.216
r_symmetry_vdw_refined0.189
r_symmetry_hbond_refined0.165
r_xyhbond_nbd_refined0.146
r_metal_ion_refined0.131
r_chiral_restr0.081
r_bond_refined_d0.01
r_gen_planes_refined0.005
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3691
Nucleic Acid Atoms
Solvent Atoms559
Heterogen Atoms108

Software

Software
Software NamePurpose
REFMACrefinement