X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
128118% polyethylene glycol 3350, 100 mM MES pH 6.1-6.5, 260 mM potassium thiocyanate, VAPOR DIFFUSION, HANGING DROP, temperature 281K
Crystal Properties
Matthews coefficientSolvent content
2.7755.57

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 97.43α = 90
b = 244.627β = 90
c = 51.993γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152008-11-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 12.3.1ALS12.3.1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.155097.10.047233.4666772.3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.152.2386.60.4332.32.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.15506323163231337496.90.2180.2150.262RANDOM44.65
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.17-1.691.86
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.153
r_dihedral_angle_4_deg20.261
r_dihedral_angle_3_deg18.495
r_dihedral_angle_1_deg6.279
r_scangle_it3.225
r_scbond_it1.949
r_angle_refined_deg1.426
r_mcangle_it1.285
r_mcbond_it0.666
r_nbtor_refined0.307
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.153
r_dihedral_angle_4_deg20.261
r_dihedral_angle_3_deg18.495
r_dihedral_angle_1_deg6.279
r_scangle_it3.225
r_scbond_it1.949
r_angle_refined_deg1.426
r_mcangle_it1.285
r_mcbond_it0.666
r_nbtor_refined0.307
r_symmetry_hbond_refined0.232
r_nbd_refined0.204
r_xyhbond_nbd_refined0.197
r_symmetry_vdw_refined0.168
r_chiral_restr0.1
r_bond_refined_d0.012
r_gen_planes_refined0.005
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7254
Nucleic Acid Atoms
Solvent Atoms428
Heterogen Atoms6

Software

Software
Software NamePurpose
HKL-2000data collection
PHASERphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling