X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.52890.1M Heoes, 0.2M NH4(OAC0), 25% PEG3350, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 289K
Crystal Properties
Matthews coefficientSolvent content
2.2846.11

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 85.129α = 90
b = 91.53β = 90
c = 167.206γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315mirrors2008-06-25MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-BM0.9794APS19-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.383.6298.140.11817.58.555865548262239
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.32.35983.290.6441.656.34303

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.383.625586554826292598.140.192440.190050.23661RANDOM38.249
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.720.79-0.06
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.981
r_dihedral_angle_3_deg20.976
r_dihedral_angle_4_deg18.91
r_dihedral_angle_1_deg7.822
r_scangle_it3.677
r_scbond_it2.581
r_angle_refined_deg2.063
r_mcangle_it1.598
r_mcbond_it1.284
r_angle_other_deg1.209
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.981
r_dihedral_angle_3_deg20.976
r_dihedral_angle_4_deg18.91
r_dihedral_angle_1_deg7.822
r_scangle_it3.677
r_scbond_it2.581
r_angle_refined_deg2.063
r_mcangle_it1.598
r_mcbond_it1.284
r_angle_other_deg1.209
r_nbd_refined0.239
r_mcbond_other0.223
r_nbd_other0.22
r_symmetry_vdw_other0.214
r_symmetry_vdw_refined0.212
r_nbtor_refined0.186
r_xyhbond_nbd_refined0.184
r_symmetry_hbond_refined0.159
r_chiral_restr0.132
r_nbtor_other0.098
r_bond_refined_d0.025
r_gen_planes_refined0.007
r_bond_other_d0.002
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms9842
Nucleic Acid Atoms
Solvent Atoms244
Heterogen Atoms5

Software

Software
Software NamePurpose
SBC-Collectdata collection
HKL-3000phasing
REFMACrefinement
HKL-3000data reduction
HKL-3000data scaling