X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.52950.1 M HEPES, 1.8 M ammonium sulfate, 4% PEG 400, 12 mg/mL protein, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
2.8256.39

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 231.925α = 90
b = 145.231β = 93.82
c = 52.972γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 2102007-02-28MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONCHESS BEAMLINE F20.974CHESSF2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.339.40698.10.0880.08819.16.976059
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.32.4288.20.5160.51624.69916

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.339.4067605876058380498.150.1990.1990.1970.234RANDOM49.501
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.44-0.34-0.060.46
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.586
r_dihedral_angle_4_deg17.649
r_dihedral_angle_3_deg16.101
r_dihedral_angle_1_deg5.814
r_scangle_it2.131
r_scbond_it1.498
r_angle_refined_deg1.161
r_mcangle_it1.01
r_mcbond_it0.884
r_angle_other_deg0.841
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.586
r_dihedral_angle_4_deg17.649
r_dihedral_angle_3_deg16.101
r_dihedral_angle_1_deg5.814
r_scangle_it2.131
r_scbond_it1.498
r_angle_refined_deg1.161
r_mcangle_it1.01
r_mcbond_it0.884
r_angle_other_deg0.841
r_symmetry_hbond_refined0.24
r_nbd_refined0.209
r_symmetry_vdw_other0.195
r_nbd_other0.192
r_xyhbond_nbd_other0.181
r_nbtor_refined0.174
r_xyhbond_nbd_refined0.17
r_symmetry_vdw_refined0.135
r_mcbond_other0.11
r_nbtor_other0.087
r_chiral_restr0.064
r_bond_refined_d0.011
r_gen_planes_refined0.004
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms9878
Nucleic Acid Atoms
Solvent Atoms133
Heterogen Atoms71

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction