X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.529310% PEG 8000, 1% PEG 3350, 100MM HEPES (PH 7.5), 10MM SODIUM THIOCYANATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 273K, pH 7.50, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.244.21

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 58.713α = 90
b = 57.648β = 102.96
c = 92.547γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315GE(220) CRYSTAL AND MULTILAYER2005-12-18MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-4ESRFID14-4

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.852098.10.08516.852439
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.851.9287.50.4491.7

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT1.8519.5749457130098.30.2150.21380.25989RANDOM30.897
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.270.18-0.31
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg40.945
r_dihedral_angle_3_deg15.849
r_dihedral_angle_4_deg15.169
r_scangle_it5.068
r_dihedral_angle_1_deg4.839
r_scbond_it3.28
r_mcangle_it1.683
r_angle_refined_deg1.454
r_mcbond_it1.074
r_symmetry_vdw_refined0.304
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg40.945
r_dihedral_angle_3_deg15.849
r_dihedral_angle_4_deg15.169
r_scangle_it5.068
r_dihedral_angle_1_deg4.839
r_scbond_it3.28
r_mcangle_it1.683
r_angle_refined_deg1.454
r_mcbond_it1.074
r_symmetry_vdw_refined0.304
r_nbtor_refined0.294
r_nbd_refined0.215
r_symmetry_hbond_refined0.178
r_xyhbond_nbd_refined0.168
r_chiral_restr0.099
r_bond_refined_d0.016
r_gen_planes_refined0.006
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4678
Nucleic Acid Atoms
Solvent Atoms332
Heterogen Atoms

Software

Software
Software NamePurpose
SOLVEphasing
REFMACrefinement
ADSCdata collection
DENZOdata reduction