3BWZ

Crystal structure of the type II cohesin module from the cellulosome of Acetivibrio cellulolyticus with an extended linker conformation


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP4.62932.0 M ammonium sulfate and 0.1 M sodium acetate trihydrate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.3447.52

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 37.455α = 90
b = 55.78β = 90
c = 87.912γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 2102001-12-14MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-10.934ESRFID14-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.247.0995.80.0460.046134534075340710.1
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.21.2299.10.170.17442848

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1ZV91.247.0953047280295.610.123520.123520.122010.15209RANDOM9.558
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.740.160.58
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.531
r_dihedral_angle_3_deg11.822
r_dihedral_angle_1_deg6.916
r_sphericity_free6.431
r_scangle_it4.949
r_dihedral_angle_4_deg4.216
r_scbond_it3.669
r_sphericity_bonded3.649
r_mcangle_it2.943
r_angle_other_deg2.759
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.531
r_dihedral_angle_3_deg11.822
r_dihedral_angle_1_deg6.916
r_sphericity_free6.431
r_scangle_it4.949
r_dihedral_angle_4_deg4.216
r_scbond_it3.669
r_sphericity_bonded3.649
r_mcangle_it2.943
r_angle_other_deg2.759
r_mcbond_it2.482
r_rigid_bond_restr1.856
r_angle_refined_deg1.59
r_mcbond_other1.323
r_symmetry_vdw_refined0.293
r_symmetry_vdw_other0.249
r_symmetry_hbond_refined0.233
r_nbd_refined0.218
r_nbd_other0.188
r_xyhbond_nbd_refined0.177
r_nbtor_refined0.17
r_chiral_restr0.099
r_nbtor_other0.092
r_bond_refined_d0.013
r_gen_planes_refined0.008
r_bond_other_d0.003
r_gen_planes_other0.002
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1367
Nucleic Acid Atoms
Solvent Atoms361
Heterogen Atoms11

Software

Software
Software NamePurpose
HKL-2000data collection
MOLREPphasing
REFMACrefinement
HKL-3000data reduction
HKL-3000data scaling