2YMN
Organization of the Influenza Virus Replication Machinery
ELECTRON MICROSCOPY
Sample |
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INFLUENZA VIRUS RIBONUCLEOPROTEIN COMPLEX CENTRAL FILAMENT REGION |
Specimen Preparation | |
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Sample Aggregation State | PARTICLE |
Vitrification Instrument | FEI VITROBOT MARK II |
Cryogen Name | ETHANE |
Sample Vitrification Details | VITRIFICATION 1 -- CRYOGEN- ETHANE, HUMIDITY- 85, INSTRUMENT- FEI VITROBOT MARK II, |
3D Reconstruction | |
---|---|
Reconstruction Method | HELICAL |
Number of Particles | 31573 |
Reported Resolution (Å) | 20 |
Resolution Method | |
Other Details | SUBMISSION BASED ON EXPERIMENTAL DATA FROM EMDB EMD-2209.(DEPOSITION ID: 11133) |
Refinement Type | |
Symmetry Type | HELICAL |
Map-Model Fitting and Refinement | |||||
---|---|---|---|---|---|
Id | 1 (2IQH) | ||||
Refinement Space | REAL | ||||
Refinement Protocol | OTHER | ||||
Refinement Target | |||||
Overall B Value | |||||
Fitting Procedure | |||||
Details | REFINEMENT PROTOCOL--X-RAY |
Data Acquisition | |||||||||
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Detector Type | GENERIC CCD | ||||||||
Electron Dose (electrons/Å**2) | 15 |
Imaging Experiment | 1 |
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Date of Experiment | 2010-08-27 |
Temperature (Kelvin) | |
Microscope Model | FEI TECNAI 20 |
Minimum Defocus (nm) | |
Maximum Defocus (nm) | |
Minimum Tilt Angle (degrees) | |
Maximum Tilt Angle (degrees) | |
Nominal CS | |
Imaging Mode | BRIGHT FIELD |
Specimen Holder Model | |
Nominal Magnification | 50000 |
Calibrated Magnification | |
Source | FIELD EMISSION GUN |
Acceleration Voltage (kV) | 120 |
Imaging Details |
EM Software | ||
---|---|---|
Task | Software Package | Version |
CTF CORRECTION | CTFFIND | 3 |
MODEL FITTING | UCSF Chimera | |
RECONSTRUCTION | Appion | |
RECONSTRUCTION | IHRSR | |
RECONSTRUCTION | IMAGIC | |
RECONSTRUCTION | SPIDER | |
RECONSTRUCTION | Xmipp |
Image Processing | ||||
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CTF Correction Type | CTF Correction Details | Number of Particles Selected | Particle Selection Details | |
WHOLEIMAGE |