SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
22D 1H-13C HSQC1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
33D HNCO1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
43D HN(CA)CO1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
53D HNCA1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
63D HN(CO)CA1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
73D HNCACB1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
83D CBCA(CO)NH1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
93D HBHA(CO)NH1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
103D C(CO)NH1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
113D HCCH-TOCSY1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
123D HCCH-COSY1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
132D (HB)CB(CGCD)HD1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
143D 1H-15N NOESY1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
153D 1H-13C NOESY1.1 mM [U-13C; U-15N] crka1 SH2 domain-1, 20 mM [U-2H] TRIS-2, 100 mM sodium chloride-3, 0.02 % sodium azide-4, 1 mM [U-2H] DTT-5, 10 % [U-2H] D2O-690% H2O/10% D2O1207.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, molecular dynamicsXwinNMR
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number21
Representative Model1 (minimized average structure)
Additional NMR Experimental Information
DetailsTHE FIRST MODEL 1 IS THE ENERGY-MINIMIZED MEAN STRUCTURE CALCULATED FROM THE OTHER 20 STRUCTURES.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR3.6Bruker Biospin
2collectionTopSpin2.1Bruker Biospin
3processingNMRPipe20110801Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4data analysisNMRView5.2.2_01Johnson, One Moon Scientific
5data analysisKUJIRA0.9843Kobayashi, Iwahara, Koshiba, Tomizawa, Tochio, G ntert, Kigawa, Yokoyama
6chemical shift assignmentKUJIRA0.9843Kobayashi, Iwahara, Koshiba, Tomizawa, Tochio, G ntert, Kigawa, Yokoyama
7structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
8refinementAmber9Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollman
9refinementCYANA