2OV6

The NMR structure of subunit F of the Methanogenic A1Ao ATP synthase and its interaction with the nucleotide-binding subunit B


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 15N-edited-HSQC-NOESY0.5mM F subunit uniformly labeled 15N; 15N, 13C; 25mM phosphate buffer pH 6.5; 90% H2O, 10% D2O90% H2O/10% D2O6.5AMBIENT288
2HNCA0.5mM F subunit uniformly labeled 15N; 15N, 13C; 25mM phosphate buffer pH 6.5; 90% H2O, 10% D2O90% H2O/10% D2O6.5AMBIENT288
3HNCACB0.5mM F subunit uniformly labeled 15N; 15N, 13C; 25mM phosphate buffer pH 6.5; 90% H2O, 10% D2O90% H2O/10% D2O6.5AMBIENT288
4CBCACONH0.5mM F subunit uniformly labeled 15N; 15N, 13C; 25mM phosphate buffer pH 6.5; 90% H2O, 10% D2O90% H2O/10% D2O6.5AMBIENT288
5HNCO0.5mM F subunit uniformly labeled 15N; 15N, 13C; 25mM phosphate buffer pH 6.5; 90% H2O, 10% D2O90% H2O/10% D2O6.5AMBIENT288
6HCCH-TOCSY0.5mM F subunit uniformly labeled 15N; 15N, 13C; 25mM phosphate buffer pH 6.5; 90% H2O, 10% D2O90% H2O/10% D2O6.5AMBIENT288
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
Distance constraints, Simulated annealing, Molecular dynamics, Torsion angle dynamicsTotal NMR constraints 863, Torsional angle restraints 184, Hydrogen bond restraints 32CYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThe structure was determined using triple-resonance NMR spectroscopy
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANA2.1Guentert, P.
2processingNMRPipe2.3Delaglio, F.
3collectionTopSpin1.3Bruker
4data analysisSparky3.112Goddard, T.D.
5refinementCYANA2.1Guentert, P.