2NBN
Solution NMR structure of palmitated SCP2L2 from Aedes aegypti
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 1.0 mM [U-100% 15N] entity_1-1 | 93% H2O/7% D2O | 100 | 7.0 | ambient | 298 | |
| 2 | 2D 1H-13C HSQC | 1.0 mM [U-100% 13C; U-100% 15N] entity_1-2 | 93% H2O/7% D2O | 100 | 7.0 | ambient | 298 | |
| 3 | 3D CBCA(CO)NH | 1.0 mM [U-100% 13C; U-100% 15N] entity_1-2 | 93% H2O/7% D2O | 100 | 7.0 | ambient | 298 | |
| 4 | 3D HNCACB | 1.0 mM [U-100% 13C; U-100% 15N] entity_1-2 | 93% H2O/7% D2O | 100 | 7.0 | ambient | 298 | |
| 5 | 3D HBHA(CO)NH | 1.0 mM [U-100% 13C; U-100% 15N] entity_1-2 | 93% H2O/7% D2O | 100 | 7.0 | ambient | 298 | |
| 6 | 3D HCCH-COSY | 1.0 mM [U-100% 13C; U-100% 15N] entity_1-2 | 93% H2O/7% D2O | 100 | 7.0 | ambient | 298 | |
| 7 | 3D 1H-15N NOESY | 1.0 mM [U-100% 13C; U-100% 15N] entity_1-2 | 93% H2O/7% D2O | 100 | 7.0 | ambient | 298 | |
| 8 | 3D 1H-13C NOESY | 1.0 mM [U-100% 13C; U-100% 15N] entity_1-2 | 93% H2O/7% D2O | 100 | 7.0 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 700 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| DGSA-distance geometry simulated annealing | CYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (fewest violations) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 2 | geometry optimization | MOLMOL | Koradi, Billeter and Wuthrich | |
| 3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 4 | chemical shift assignment | PINE | Bahrami, Markley, Assadi, and Eghbalnia | |
| 5 | geometry optimization | ProcheckNMR | Laskowski and MacArthur | |
| 6 | data analysis | Sparky | Goddard | |
| 7 | collection | TopSpin | Bruker Biospin | |
| 8 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich | |
