2N8M
Zipcode-binding-protein-1 KH3(DD)KH4 domains in complex with the KH4 RNA target
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.3 mM [U-100% 13C; U-100% 15N] protein | 95% H2O/5% D2O | 0.02 | 6.5 | ambient | 310 | |
2 | 2D 1H-13C HSQC | 0.3 mM [U-100% 13C; U-100% 15N] protein | 95% H2O/5% D2O | 0.02 | 6.5 | ambient | 310 | |
3 | 3D 1H-15N NOESY | 0.3 mM [U-100% 13C; U-100% 15N] protein | 95% H2O/5% D2O | 0.02 | 6.5 | ambient | 310 | |
4 | 3D 1H-13C NOESY | 0.3 mM [U-100% 13C; U-100% 15N] protein | 95% H2O/5% D2O | 0.02 | 6.5 | ambient | 310 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 800 |
2 | Bruker | AVANCE | 600 |
3 | Bruker | AVANCE | 700 |
4 | Bruker | AVANCE | 950 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics | XEASY |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 12 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | chemical shift assignment | XEASY | Bartels et al. | |
2 | structure solution | ARIA | Linge, O'Donoghue and Nilges | |
3 | refinement | ARIA | Linge, O'Donoghue and Nilges |