2MYZ
The Solution Structure of the Magnesium-bound Conantokin-R1B Mutant
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 10 mM [U-100% 2H] HEPES, 0.1 % DSS, 40 mM magnesium chloride | 90% H2O/10% D2O | 7 | ambient | 298 | ||
2 | 2D 1H-13C HSQC | 10 mM [U-100% 2H] HEPES, 0.1 % DSS, 40 mM magnesium chloride | 90% H2O/10% D2O | 7 | ambient | 298 | ||
3 | 2D 1H-1H TOCSY | 10 mM [U-100% 2H] HEPES, 0.1 % DSS, 40 mM magnesium chloride | 90% H2O/10% D2O | 7 | ambient | 298 | ||
4 | 2D DQF-COSY | 10 mM [U-100% 2H] HEPES, 0.1 % DSS, 40 mM magnesium chloride | 90% H2O/10% D2O | 7 | ambient | 298 | ||
5 | 2D 1H-1H NOESY | 10 mM [U-100% 2H] HEPES, 0.1 % DSS, 40 mM magnesium chloride | 90% H2O/10% D2O | 7 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | X-PLOR NIH |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 19 |
Representative Model | 1 (fewest violations) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
2 | chemical shift assignment | TopSpin | Bruker Biospin | |
3 | peak picking | Sparky | Goddard | |
4 | structure solution | Procheck | Laskowski, MacArthur, Smith, Jones, Hutchinson, Morris, Moss and Thornton | |
5 | data analysis | TALOS | Cornilescu, Delaglio and Bax | |
6 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore |