2MXP

Solution structure of NDP52 ubiquitin-binding zinc finger

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D CBCA(CO)NH	1 mM [U-100% 13C; U-100% 15N] entity_1-1, 1 mM [U-100% 15N] entity_1-2	90% H2O/10% D2O	0.1	6.5	ambient atm	298
2	3D HNCACB	1 mM [U-100% 13C; U-100% 15N] entity_1-1, 1 mM [U-100% 15N] entity_1-2	90% H2O/10% D2O	0.1	6.5	ambient atm	298
3	3D 1H-15N NOESY	1 mM [U-100% 13C; U-100% 15N] entity_1-1, 1 mM [U-100% 15N] entity_1-2	90% H2O/10% D2O	0.1	6.5	ambient atm	298
4	2D 1H-13C HSQC	1 mM [U-100% 13C; U-100% 15N] entity_1-1, 1 mM [U-100% 15N] entity_1-2	90% H2O/10% D2O	0.1	6.5	ambient atm	298
5	3D HCCH-TOCSY	1 mM [U-100% 13C; U-100% 15N] entity_1-3	100% D2O	0.1	6.5	ambient atm	298
6	3D 1H-13C NOESY aliphatic	1 mM [U-100% 13C; U-100% 15N] entity_1-3	100% D2O	0.1	6.5	ambient atm	298
7	2D 1H-1H NOESY	1.2 mM entity_1-4	100% D2O	0.1	6.5	ambient atm	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Agilent	INOVA	800

NMR Refinement
Method	Details	Software
simulated annealing		NMRPipe

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	200
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	chemical shift assignment	PIPP		Garrett
3	data analysis	PIPP		Garrett
4	data analysis	Sparky		Goddard
5	chemical shift assignment	Sparky		Goddard
6	structure solution	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
7	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read