2MQ9
Solution structure of E55Q mutant of eRF1 N-domain
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 20 mM MES-1, 100 mM potassium chloride-2, 2 mM DTT-3 | 95% H2O/5% D2O | 100 | 6.5 | ambient | 298 | |
2 | 3D HNCA | 20 mM MES-1, 100 mM potassium chloride-2, 2 mM DTT-3 | 95% H2O/5% D2O | 100 | 6.5 | ambient | 298 | |
3 | 3D 1H-15N NOESY | 20 mM MES-1, 100 mM potassium chloride-2, 2 mM DTT-3 | 95% H2O/5% D2O | 100 | 6.5 | ambient | 298 | |
4 | 3D 1H-13C NOESY | 20 mM MES-1, 100 mM potassium chloride-2, 2 mM DTT-3 | 95% H2O/5% D2O | 100 | 6.5 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
2 | Bruker | AVANCE | 700 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
torsion angle dynamics, simulated annealing | CYANA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CYANA | Guntert, Mumenthaler, Keller and Wuthrich, Bruker Biospin | |
2 | chemical shift assignment | CYANA | Guntert, Mumenthaler, Keller and Wuthrich, Bruker Biospin | |
3 | collection | CYANA | Guntert, Mumenthaler, Keller and Wuthrich, Bruker Biospin | |
4 | refinement | CYANA | ||
5 | refinement | CNS |