2MOU
Solution structure of StAR-related lipid transfer domain protein 6 (STARD6)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D HNCACB | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 | |
2 | 3D C(CO)NH | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 | |
3 | 3D HNCO | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 | |
4 | 2D 1H-15N HSQC | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 | |
5 | 3D HN(CO)CA | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 | |
6 | 3D HNHA | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 | |
7 | 3D H(CCO)NH | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 | |
8 | 3D 1H-15N NOESY | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 | |
9 | 3D HCCH-TOCSY | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 | |
10 | 2D 1H-13C HSQC | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 | |
11 | 3D 1H-13C NOESY aliphatic | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 | |
12 | 2D 1H-13C HSQC aromatic | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 | |
13 | 3D 1H-13C NOESY aromatic | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 | |
14 | 2D 1H-13C HSQC aliphatic | 1 mM [U-100% 13C; U-100% 15N] StAR_D6 | 90% H2O/10% D2O | 0.100 | 7.000 | 1.000 atm | 298.150 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UnityInova | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | ARIA |
NMR Ensemble Information | |
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Conformer Selection Criteria | Lowest energy, restraint violations and Ramachandran parameters |
Conformers Calculated Total Number | 1000 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | structure calculation, refinement | ARIA | 2.2 | Rieping, Habeck, Bardiaux, Bernard, Malliavi, Nilges |
2 | data analysis | CcpNmr Analysis | 2.2.2 | Vranken, Boucher, Stevens, Fogh, Pajon, Llinas, Ulrich, Markley, Ionides, Laue |
3 | dihedral restraints from chemical shifts | DANGLE | 1.1 | Cheung, Maguire, Stevens, Broadhurst |
4 | file conversion | NMRPipe | 2.0 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer, Bax |
5 | structure calculation, refinement | CNS | Brunger, Adams, Clore, Gros, Nilges and Read |