2MLW

New Cyt-like delta-endotoxins from Dickeya dadantii - CytC protein

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D HNCO	0.3 mM [U-13C; U-15N] CytC, 50 mM Tris, 100 mM sodium chloride, 1 mM EDTA, 5 mM DTT	90% H2O/10% D2O	0.1	7.0	ambient	298
2	3D HNCA	0.3 mM [U-13C; U-15N] CytC, 50 mM Tris, 100 mM sodium chloride, 1 mM EDTA, 5 mM DTT	90% H2O/10% D2O	0.1	7.0	ambient	298
3	3D HNCACB	0.3 mM [U-13C; U-15N] CytC, 50 mM Tris, 100 mM sodium chloride, 1 mM EDTA, 5 mM DTT	90% H2O/10% D2O	0.1	7.0	ambient	298
4	3D CBCA(CO)NH	0.3 mM [U-13C; U-15N] CytC, 50 mM Tris, 100 mM sodium chloride, 1 mM EDTA, 5 mM DTT	90% H2O/10% D2O	0.1	7.0	ambient	298
5	3D C(CO)NH	0.3 mM [U-13C; U-15N] CytC, 50 mM Tris, 100 mM sodium chloride, 1 mM EDTA, 5 mM DTT	90% H2O/10% D2O	0.1	7.0	ambient	298
6	3D HCCH-TOCSY	0.3 mM [U-13C; U-15N] CytC, 50 mM Tris, 100 mM sodium chloride, 1 mM EDTA, 5 mM DTT	90% H2O/10% D2O	0.1	7.0	ambient	298
7	3D 1H-15N TOCSY	0.3 mM [U-13C; U-15N] CytC, 50 mM Tris, 100 mM sodium chloride, 1 mM EDTA, 5 mM DTT	90% H2O/10% D2O	0.1	7.0	ambient	298
8	3D 1H-15N NOESY	0.3 mM [U-13C; U-15N] CytC, 50 mM Tris, 100 mM sodium chloride, 1 mM EDTA, 5 mM DTT	90% H2O/10% D2O	0.1	7.0	ambient	298
9	3D 1H-13C NOESY	0.3 mM [U-13C; U-15N] CytC, 50 mM Tris, 100 mM sodium chloride, 1 mM EDTA, 5 mM DTT	90% H2O/10% D2O	0.1	7.0	ambient	298
10	2D 1H-15N HSQC	0.3 mM [U-13C; U-15N] CytC, 50 mM Tris, 100 mM sodium chloride, 1 mM EDTA, 5 mM DTT	90% H2O/10% D2O	0.1	7.0	ambient	298
11	2D 1H-13C HSQC	0.3 mM [U-13C; U-15N] CytC, 50 mM Tris, 100 mM sodium chloride, 1 mM EDTA, 5 mM DTT	90% H2O/10% D2O	0.1	7.0	ambient	298
12	3D HN(CO)CA	0.3 mM [U-13C; U-15N] CytC, 50 mM Tris, 100 mM sodium chloride, 1 mM EDTA, 5 mM DTT	90% H2O/10% D2O	0.1	7.0	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	600

NMR Refinement
Method	Details	Software
simulated annealing		VnmrJ

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	500
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VnmrJ		Varian
2	data analysis	CcpNMR	2.1.5	CCPN
3	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4	structure solution	ARIA	2.3	Linge, O'Donoghue and Nilges
5	refinement	ARIA		Linge, O'Donoghue and Nilges