2MDL
Structure and NMR assignments of Scylla Serrata anti lipopolysaccharide Factor-24 (SsALF-24)
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 0.5 mM Scylla Serrata anti lipopolysaccharide Factor-1 | 93% H2O/7% D2O | 7 | ambient | 298 | ||
| 2 | 2D 1H-13C HSQC | 0.5 mM Scylla Serrata anti lipopolysaccharide Factor-1 | 93% H2O/7% D2O | 7 | ambient | 298 | ||
| 3 | 2D DQF-COSY | 0.5 mM Scylla Serrata anti lipopolysaccharide Factor-1 | 93% H2O/7% D2O | 7 | ambient | 298 | ||
| 4 | 2D 1H-1H COSY | 0.5 mM Scylla Serrata anti lipopolysaccharide Factor-1 | 93% H2O/7% D2O | 7 | ambient | 298 | ||
| 5 | 2D 1H-1H NOESY | 0.5 mM Scylla Serrata anti lipopolysaccharide Factor-1 | 93% H2O/7% D2O | 7 | ambient | 298 | ||
| 6 | 2D 1H-1H TOCSY | 0.5 mM Scylla Serrata anti lipopolysaccharide Factor-1 | 93% H2O/7% D2O | 7 | ambient | 298 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| 2 | Bruker | Avance | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics | TOPSPIN | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | target function |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | TOPSPIN | Bruker Biospin | |
| 2 | processing | TOPSPIN | Bruker Biospin | |
| 3 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 4 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 5 | chemical shift assignment | CCPNMR | CCPN | |
| 6 | data analysis | CCPNMR | CCPN | |
| 7 | peak picking | CCPNMR | CCPN | |
