2MDG

Solution NMR Structure of Zinc finger protein 423 from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR7298F


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.17 mM [U-100% 13C; U-100% 15N] HR7298F.005, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 50 uM ZnSO490% H2O/10% D2O1006.5ambient298
22D 1H-13C HSQC aliphatic0.17 mM [U-100% 13C; U-100% 15N] HR7298F.005, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 50 uM ZnSO490% H2O/10% D2O1006.5ambient298
33D HNCO0.17 mM [U-100% 13C; U-100% 15N] HR7298F.005, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 50 uM ZnSO490% H2O/10% D2O1006.5ambient298
43D CBCA(CO)NH0.17 mM [U-100% 13C; U-100% 15N] HR7298F.005, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 50 uM ZnSO490% H2O/10% D2O1006.5ambient298
53D HNCACB0.17 mM [U-100% 13C; U-100% 15N] HR7298F.005, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 50 uM ZnSO490% H2O/10% D2O1006.5ambient298
63D H(CCO)NH0.17 mM [U-100% 13C; U-100% 15N] HR7298F.005, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 50 uM ZnSO490% H2O/10% D2O1006.5ambient298
73D HCCH-TOCSY0.17 mM [U-100% 13C; U-100% 15N] HR7298F.005, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 50 uM ZnSO490% H2O/10% D2O1006.5ambient298
83D 1H-15N NOESY0.51 mM [U-5% 13C; U-100% 15N] HR7298F.009, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 50 uM ZnSO495% H2O/5% D2O1006.5ambient298
93D 1H-13C NOESY aliphatic0.17 mM [U-100% 13C; U-100% 15N] HR7298F.005, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 50 uM ZnSO490% H2O/10% D2O1006.5ambient298
102D 1H-13C CT HSQC0.51 mM [U-5% 13C; U-100% 15N] HR7298F.009, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 50 uM ZnSO495% H2O/5% D2O1006.5ambient298
112D 1H-15N J-modulation HSQC0.17 mM [U-100% 13C; U-100% 15N] HR7298F.005, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 50 uM ZnSO490% H2O/10% D2O1006.5ambient298
122D 1H-15N J-modulation HSQC0.51 mM [U-5% 13C; U-100% 15N] HR7298F.0059, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 4.2 % C12E5 PEG/Hexanol, 50 uM ZnSO495% H2O/5% D2O1006.5ambient298
132D 1H-15N CO filtered TROSY0.17 mM [U-100% 13C; U-100% 15N] HR7298F.005, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 50 uM ZnSO490% H2O/10% D2O1006.5ambient298
142D 1H-15N CO-filtered TROSY0.17 mM [U-100% 13C; U-100% 15N] HR7298F.005, 0.02 % NaN3, 10 mM DTT, 5 mM CaCL2, 100 mM NaCL, 1 x Proteinase Inhibitors, 20 mM MES pH 6.5, 10 % [U-100% 2H] D2O, 50 uM DSS, 50 uM ZnSO4, 4.2 % C12E5 PEG?Hexanol90% H2O/10% D2O1006.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2VarianAvance900
3VarianAvance600
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinemen,structure solution,geometry optimizationCNS1.3Brunger, Adams, Clore, Gros, Nilges and Read
2structure solutionCYANA3.0Guntert, Mumenthaler and Wuthrich
3processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4collectionVNMRJVarian
5chemical shift assignmentSPARKY3.113Goddard
6structure validationPALESPALES (Zweckstetter, Bax)
7structure validationPSVS1.5Bhattacharya, Montelione
8refinementCNS