2M8G

Structure, function, and tethering of DNA-binding domains in 54 transcriptional activators

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1 mM [U-100% 13C; U-100% 15N] sodium phosphate, 1 mM [U-100% 15N] sodium phosphate	95% H2O/5% D2O	100	7		303
2	2D 1H-13C HSQC	1 mM [U-100% 13C; U-100% 15N] sodium phosphate, 1 mM [U-100% 15N] sodium phosphate	95% H2O/5% D2O	100	7		303
3	3D HNCA	1 mM [U-100% 13C; U-100% 15N] sodium phosphate, 1 mM [U-100% 15N] sodium phosphate	95% H2O/5% D2O	100	7		303
4	3D HN(CO)CA	1 mM [U-100% 13C; U-100% 15N] sodium phosphate, 1 mM [U-100% 15N] sodium phosphate	95% H2O/5% D2O	100	7		303
5	3D HNCACB	1 mM [U-100% 13C; U-100% 15N] sodium phosphate, 1 mM [U-100% 15N] sodium phosphate	95% H2O/5% D2O	100	7		303
6	3D CBCA(CO)NH	1 mM [U-100% 13C; U-100% 15N] sodium phosphate, 1 mM [U-100% 15N] sodium phosphate	95% H2O/5% D2O	100	7		303
7	3D C(CO)NH	1 mM [U-100% 13C; U-100% 15N] sodium phosphate, 1 mM [U-100% 15N] sodium phosphate	95% H2O/5% D2O	100	7		303
8	3D H(CCO)NH	1 mM [U-100% 13C; U-100% 15N] sodium phosphate, 1 mM [U-100% 15N] sodium phosphate	95% H2O/5% D2O	100	7		303
9	3D HBHA(CO)NH	1 mM [U-100% 13C; U-100% 15N] sodium phosphate, 1 mM [U-100% 15N] sodium phosphate	95% H2O/5% D2O	100	7		303
10	3D HCCH-TOCSY	1 mM [U-100% 13C; U-100% 15N] sodium phosphate	100% D2O	100	7		303
11	3D 1H-15N NOESY	1 mM [U-100% 13C; U-100% 15N] sodium phosphate, 1 mM [U-100% 15N] sodium phosphate	95% H2O/5% D2O	100	7		303
12	3D 1H-13C NOESY	1 mM [U-100% 13C; U-100% 15N] sodium phosphate	100% D2O	100	7		303

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	DRX	800
2	Bruker	DRX	900

NMR Refinement
Method	Details	Software
simulated annealing		NMRPipe

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (fewest violations)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2	peak picking	Sparky		Goddard
3	data analysis	Sparky		Goddard
4	chemical shift assignment	Sparky		Goddard
5	structure solution	CYANA		Guntert, Mumenthaler and Wuthrich
6	refinement	MOLMOL		Koradi, Billeter and Wuthrich
7	chemical shift calculation	TALOS		Cornilescu, Delaglio and Bax
8	refinement	CYANA		Guntert, Mumenthaler and Wuthrich