2M1O
ID3 stem
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-13C HSQC aliphatic | 1 mM RNA, 80 mM sodium chloride, 0.1 mM EDTA | 100% D2O | 0.08 | 6.4 | ambient | 288 | |
2 | 2D 1H-13C HSQC aromatic | 1 mM RNA, 80 mM sodium chloride, 0.1 mM EDTA | 100% D2O | 0.08 | 6.4 | ambient | 288 | |
3 | 2D 1H-1H NOESY | 1 mM RNA, 80 mM sodium chloride, 0.1 mM EDTA | 100% D2O | 0.08 | 6.4 | ambient | 288 | |
4 | 2D 1H-1H TOCSY | 1 mM RNA, 80 mM sodium chloride, 0.1 mM EDTA | 100% D2O | 0.08 | 6.4 | ambient | 288 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics | TopSpin |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | TopSpin | Bruker Biospin | |
2 | structure solution | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore | |
3 | chemical shift assignment | CCPN | CCPN | |
4 | chemical shift assignment | Sparky | Goddard | |
5 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore |