2M0G

Structure, phosphorylation and U2AF65 binding of the Nterminal Domain of splicing factor 1 during 3 splice site Recognition


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC100-600 uM [U-15N] protein, 100-600 uM [U-13C; U-15N] entity, 100-600 uM [U-13C; U-15N; U-2H] entity90% H2O/10% D2O706.5ambient298
22D 1H-13C HSQC100-600 uM [U-15N] protein, 100-600 uM [U-13C; U-15N] entity, 100-600 uM [U-13C; U-15N; U-2H] entity90% H2O/10% D2O706.5ambient298
32D 1H-1H NOESY100-600 uM [U-15N] protein, 100-600 uM [U-13C; U-15N] entity, 100-600 uM [U-13C; U-15N; U-2H] entity90% H2O/10% D2O706.5ambient298
43D CBCA(CO)NH100-600 uM [U-15N] protein, 100-600 uM [U-13C; U-15N] entity, 100-600 uM [U-13C; U-15N; U-2H] entity90% H2O/10% D2O706.5ambient298
53D HNCA100-600 uM [U-15N] protein, 100-600 uM [U-13C; U-15N] entity, 100-600 uM [U-13C; U-15N; U-2H] entity90% H2O/10% D2O706.5ambient298
63D HNCACB100-600 uM [U-15N] protein, 100-600 uM [U-13C; U-15N] entity, 100-600 uM [U-13C; U-15N; U-2H] entity90% H2O/10% D2O706.5ambient298
73D HCCH-TOCSY100-600 uM [U-15N] protein, 100-600 uM [U-13C; U-15N] entity, 100-600 uM [U-13C; U-15N; U-2H] entity90% H2O/10% D2O706.5ambient298
83D 1H-15N NOESY100-600 uM [U-15N] protein, 100-600 uM [U-13C; U-15N] entity, 100-600 uM [U-13C; U-15N; U-2H] entity90% H2O/10% D2O706.5ambient298
93D 1H-13C NOESY aliphatic100-600 uM [U-15N] protein, 100-600 uM [U-13C; U-15N] entity, 100-600 uM [U-13C; U-15N; U-2H] entity90% H2O/10% D2O706.5ambient298
103D 1H-13C NOESY aromatic100-600 uM [U-15N] protein, 100-600 uM [U-13C; U-15N] entity, 100-600 uM [U-13C; U-15N; U-2H] entity90% H2O/10% D2O706.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance900
2BrukerAvance750
3BrukerAvance600
4BrukerAvance500
NMR Refinement
MethodDetailsSoftware
simulated annealingARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionARIA2.1Linge, O'Donoghue and Nilges
2structure solutionCYANA3.0Guntert, Mumenthaler and Wuthrich
3processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4chemical shift assignmentSPARKYGoddard
5collectionTOPSPINBruker Biospin
6processingTOPSPINBruker Biospin
7refinementARIA2.1Linge, O'Donoghue and Nilges
8refinementCYANA3.0Guntert, Mumenthaler and Wuthrich