2LWJ

NMR solution structure Myxoccoccus xanthus CdnL

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-1H COSY	1 mM CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	ambient	298
2	2D 1H-1H TOCSY	1 mM CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	ambient	298
3	2D 1H-1H NOESY	1 mM CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	ambient	298
4	2D 1H-1H COSY	1 mM CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	100% D2O	0.15	7.0	ambient	298
5	2D 1H-1H TOCSY	1 mM CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	100% D2O	0.15	7.0	ambient	298
6	2D 1H-1H NOESY	1 mM CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	100% D2O	0.15	7.0	ambient	298
7	2D 1H-15N HSQC	1 mM [U-100% 13C; U-100% 15N] CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	ambient	298
8	3D HNCO	1 mM [U-100% 13C; U-100% 15N] CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	ambient	298
9	3D HNCA	1 mM [U-100% 13C; U-100% 15N] CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	ambient	298
10	3D CBCA(CO)NH	1 mM [U-100% 13C; U-100% 15N] CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	ambient	298
11	2D 1H-13C HSQC aliphatic	1 mM [U-100% 13C; U-100% 15N] CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	100% D2O	0.15	7.0	ambient	298
12	3D HCCH-TOCSY	1 mM [U-100% 13C; U-100% 15N] CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	100% D2O	0.15	7.0	ambient	298
13	3D 1H-13C NOESY aliphatic	1 mM [U-100% 13C; U-100% 15N] CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	100% D2O	0.15	7.0	ambient	298
14	2D 1H-1H COSY	0.25 mM CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.1 mM DSS	90% H2O/10% D2O	0.15	7.0	ambient	298
15	2D 1H-1H TOCSY	0.25 mM CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.1 mM DSS	90% H2O/10% D2O	0.15	7.0	ambient	298
16	2D 1H-1H NOESY	0.25 mM CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.1 mM DSS	90% H2O/10% D2O	0.15	7.0	ambient	298
17	2D 1H-1H COSY	0.25 mM CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.1 mM DSS	100% D2O	0.15	7.0	ambient	298
18	2D 1H-1H TOCSY	0.25 mM CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.1 mM DSS	100% D2O	0.15	7.0	ambient	298
19	2D 1H-1H NOESY	0.25 mM CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.1 mM DSS	100% D2O	0.15	7.0	ambient	298
20	2D 1H-15N HSQC	0.25 mM [U-100% 13C; U-100% 15N] CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	ambient	298
21	2D 1H-13C HSQC aliphatic	0.25 mM [U-100% 13C; U-100% 15N] CdnL, 50 mM sodium phosphate, 100 mM sodium chloride, 0.05 % sodium azide, 2 mM beta-mercaptoethanol, 0.5 mM DSS	90% H2O/10% D2O	0.15	7.0	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	800

NMR Refinement
Method	Details	Software
simulated annealing, molecular dynamics		TopSpin

NMR Ensemble Information
Conformer Selection Criteria	target function
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	TopSpin		Bruker Biospin
2	processing	TopSpin		Bruker Biospin
3	peak picking	Sparky		Goddard
4	chemical shift assignment	Sparky		Goddard
5	structure solution	CYANA		Guntert, Mumenthaler and Wuthrich
6	refinement	Amber		Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
7	refinement	CYANA		Guntert, Mumenthaler and Wuthrich