2LL4

HADDOCK structure of TgMIC4-A5/lacto-N-biose complex, based on NOE-derived distance restraints


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-13C HSQC aromatic100 uM [U-98% 13C; U-98% 15N] TgMIC4-A5, 20 mM potassium phosphate, 100 mM sodium chloride, 500 uM Lacto-N-biose90% H2O/10% D2O0.76.5ambient303
22D 1H-1H TOCSY10 mM Lacto-N-biose100% D2O
32D DQF-COSY10 mM Lacto-N-biose100% D2O
42D 1H-1H NOESY10 mM Lacto-N-biose100% D2O
52D 1H-13C HSQC10 mM Lacto-N-biose100% D2O
63D 1H-13C NOESY100 uM [U-98% 13C; U-98% 15N] TgMIC4-A5, 20 mM potassium phosphate, 100 mM sodium chloride, 500 uM Lacto-N-biose90% H2O/10% D2O0.76.5ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
simulated annealingNMRView
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number10
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentNMRViewJohnson, One Moon Scientific
2refinementARIA2.1Linge, O'Donoghue and Nilges
3refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read