2LH9

NMR structure of the first lotus domain of tudor domain-containing protein 7


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.5 mM [U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
23D 1H-15N NOESY1.5 mM [U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
32D 1H-13C HSQC1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
42D 1H-13C HSQC aromatic1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
53D HNCACB1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
63D CBCA(CO)NH1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
73D HNCO1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
83D HN(CA)CO1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
93D HBHA(CO)NH1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
103D CCH-TOCSY1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
113D 1H-15N NOESY1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
123D 1H-13C NOESY aliphatic1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
133D 1H-13C NOESY aromatic1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
142D 1H-15N HSQC1.5 mM [U-100% 13C; U-100% 15N] protein, 50 mM sodium acetate90% H2O/10% D2O04.3ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE700
NMR Refinement
MethodDetailsSoftware
simulated annealingCYANA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANAGuntert, Mumenthaler and Wuthrich
2refinementAmberCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollm
3chemical shift assignmentSANEDuggan, Legge, Dyson & Wright
4processingNMRViewJohnson, One Moon Scientific