Experiment: 2LDY

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D 1H-15N NOESY	0.6 mM [U-100% 15N] L1ORF1p-RMM, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
2	3D 1H-13C NOESY	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-RMM, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
3	3D CNH-NOESY	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-RMM, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
4	3D NNH-NOESY	0.6 mM [U-100% 15N] L1ORF1p-RMM, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
5	3D HNCACB	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-RMM, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
6	3D HBHA(CO)NH	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-RMM, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
7	3D C(CO)NH	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-RMM, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
8	3D CCH-TOCSY	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-RMM, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
9	3D HNCO	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-RMM, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
10	2D 15N-filtered 1H-1H NOESY	0.6 mM [U-100% 15N] L1ORF1p-RMM, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
11	3D 1H-15N NOESY	0.8 mM [U-100% 15N] L1ORF1p-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
12	3D 1H-13C NOESY	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
13	3D CNH-NOESY	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
14	3D NNH-NOESY	0.8 mM [U-100% 15N] L1ORF1p-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
15	3D CCH-NOESY	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
16	3D HNCACB	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
17	3D CBCA(CO)NH	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
18	3D C(CO)NH	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
19	3D CCH-TOCSY	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
20	3D HNCO	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
21	2D 15N-filteres 1H-1H NOESY	0.8 mM [U-100% 15N] L1ORF1p-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
22	3D 1H-15N NOESY	0.8 mM [U-100% 15N] L1ORF1p RMM-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
23	3D 1H-13C NOESY	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p RMM-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
24	3D CNH-NOESY	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p RMM-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
25	3D NNH-NOESY	0.8 mM [U-100% 15N] L1ORF1p RMM-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
26	3D CCH-NOESY	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p RMM-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
27	3D HNCACB	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p RMM-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
28	3D CBCA(CO)NH	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p RMM-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
29	3D C(CO)NH	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p RMM-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
30	3D CCH-TOCSY	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p RMM-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
31	3D HNCO	0.8 mM [U-100% 13C; U-100% 15N] L1ORF1p RMM-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291
32	2D 15N-filteres 1H-1H NOESY	0.8 mM [U-100% 15N] L1ORF1p RMM-CTD, 5 mM Tris, 300 mM sodium chloride	90% H2O/10% D2O	300	8.0	ambient	291

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	600
2	Bruker	AVANCE	800

NMR Refinement
Method	Details	Software
simulated annealing	Refinement with conformational database potential	TopSpin

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	200
Conformers Submitted Total Number	21
Representative Model	1 (minimized average structure)

Additional NMR Experimental Information
Details	Structures of the RMM and CTD domains were first determined separately, and data compared to that for the two-domain construct

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	TopSpin		Bruker Biospin
2	processing	TopSpin		Bruker Biospin
3	chemical shift assignment	Sparky	3.113	Goddard
4	data analysis	Sparky	3.113	Goddard
5	structure solution	X-PLOR NIH	2.21	Schwieters, Kuszewski, Tjandra and Clore
6	refinement	X-PLOR NIH	2.21	Schwieters, Kuszewski, Tjandra and Clore

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.

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2LDY

Solution structure of the RMM-CTD domains of human LINE-1 ORF1p