2LBW

Solution structure of the S. cerevisiae H/ACA RNP protein Nhp2p-S82W mutant


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D HNCACB20 mM [U-13C; U-15N] HEPES, 200 mM [U-13C; U-15N] potassium chloride, 1 mM [U-13C; U-15N] DTT90% H2O/10% D2O0.27.4ambient298
23D CBCA(CO)NH20 mM [U-13C; U-15N] HEPES, 200 mM [U-13C; U-15N] potassium chloride, 1 mM [U-13C; U-15N] DTT90% H2O/10% D2O0.27.4ambient298
33D HNCO20 mM [U-13C; U-15N] HEPES, 200 mM [U-13C; U-15N] potassium chloride, 1 mM [U-13C; U-15N] DTT90% H2O/10% D2O0.27.4ambient298
43D HBHA(CO)NH20 mM [U-15N] HEPES, 200 mM [U-15N] potassium chloride, 1 mM [U-15N] DTT90% H2O/10% D2O0.27.4ambient298
53D HCCH-TOCSY20 mM [U-13C; U-15N] HEPES, 200 mM [U-13C; U-15N] potassium chloride, 1 mM [U-13C; U-15N] DTT90% H2O/10% D2O0.27.4ambient298
63D 1H-13C NOESY20 mM [U-13C; U-15N] HEPES, 200 mM [U-13C; U-15N] potassium chloride, 1 mM [U-13C; U-15N] DTT100% D2O0.27.4ambient298
73D 1H-15N NOESY20 mM [U-15N] HEPES, 200 mM [U-15N] potassium chloride, 1 mM [U-15N] DTT90% H2O/10% D2O0.27.4ambient298
82D 1H-15N HSQC20 mM [U-15N] HEPES, 200 mM [U-15N] potassium chloride, 1 mM [U-15N] DTT90% H2O/10% D2O0.27.4ambient298
92D 1H-13C HSQC20 mM [U-13C; U-15N] HEPES, 200 mM [U-13C; U-15N] potassium chloride, 1 mM [U-13C; U-15N] DTT90% H2O/10% D2O0.27.4ambient298
103D C(CO)NH20 mM [U-13C; U-15N] HEPES, 200 mM [U-13C; U-15N] potassium chloride, 1 mM [U-13C; U-15N] DTT90% H2O/10% D2O0.27.4ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX800
2BrukerDRX600
NMR Refinement
MethodDetailsSoftware
simulated annealingcyana
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutioncyana2.1Guntert, Mumenthaler and Wuthrich
2chemical shift assignmentSPARKYGoddard
3data analysisSPARKYGoddard
4peak pickingSPARKYGoddard
5collectionTOPSPINBruker Biospin
6data analysisProcheckNMRLaskowski and MacArthur
7geometry optimizationTALOSCornilescu, Delaglio and Bax
8collectionXWINNMRBruker Biospin
9refinementcyana2.1Guntert, Mumenthaler and Wuthrich