SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1 mM [U-13C; U-15N; U-2H] apoE3, 100 mM sodium phosphate, 10 mM DTT, 5 mM [U-100% 2H] EDTA, 1 mM DSS90% H2O/10% D2O0.16.9ambient303
23D HNCA1 mM [U-13C; U-15N; U-2H] apoE3, 100 mM sodium phosphate, 10 mM DTT, 5 mM [U-100% 2H] EDTA, 1 mM DSS90% H2O/10% D2O0.16.9ambient303
33D HN(CO)CA1 mM [U-13C; U-15N; U-2H] apoE3, 100 mM sodium phosphate, 10 mM DTT, 5 mM [U-100% 2H] EDTA, 1 mM DSS90% H2O/10% D2O0.16.9ambient303
43D HNCACB1 mM [U-13C; U-15N; U-2H] apoE3, 100 mM sodium phosphate, 10 mM DTT, 5 mM [U-100% 2H] EDTA, 1 mM DSS90% H2O/10% D2O0.16.9ambient303
53D CBCA(CO)NH1 mM [U-13C; U-15N; U-2H] apoE3, 100 mM sodium phosphate, 10 mM DTT, 5 mM [U-100% 2H] EDTA, 1 mM DSS90% H2O/10% D2O0.16.9ambient303
63D 1H-15N NOESY1 mM [U-100% 13C; U-100% 15N; U-50% 2H] apoE3, 10 mM DTT, 1 mM DSS, 5 mM [U-100% 2H] EDTA, 100 mM sodium phosphate90% H2O/10% D2O0.16.9ambient303
74D CN NOESY1 mM [U-100% 13C; U-100% 15N; U-50% 2H] apoE3, 10 mM DTT, 1 mM DSS, 5 mM [U-100% 2H] EDTA, 100 mM sodium phosphate90% H2O/10% D2O0.16.9ambient303
83D HCCH-TOCSY1 mM [U-100% 13C; U-100% 15N; U-50% 2H] apoE3, 10 mM DTT, 1 mM DSS, 5 mM [U-100% 2H] EDTA, 100 mM sodium phosphate90% H2O/10% D2O0.16.9ambient303
93D CCC-TOCSY1 mM [U-100% 13C; U-100% 15N; U-50% 2H] apoE3, 10 mM DTT, 1 mM DSS, 5 mM [U-100% 2H] EDTA, 100 mM sodium phosphate90% H2O/10% D2O0.16.9ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealing, distance geometryVNMR
NMR Ensemble Information
Conformer Selection Criteriaall calculated structures submitted
Conformers Calculated Total Number20
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMRVarian
2processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3data analysisTALOSCornilescu, Delaglio and Bax
4structure solutionCYANAGuntert, Mumenthaler and Wuthrich
5chemical shift assignmentPIPPGarrett
6chemical shift assignmentNMRViewJohnson, One Moon Scientific
7geometry optimizationProcheckNMRLaskowski and MacArthur
8refinementProcheckNMRLaskowski and MacArthur
9geometry optimizationCNSBrunger, Adams, Clore, Gros, Nilges and Read
10data analysisCNSBrunger, Adams, Clore, Gros, Nilges and Read
11refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read