2L2T

Solution NMR structure of the ErbB4 dimeric membrane domain


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC2 mM [U-98% 15N] protein, 10 mM EDTA, 2 mM sodium azide, 12 mM DMPC, 48 mM DHPC90% H2O/10% D2O205.0ambient313
22D 1H-13C HSQC1 mM protein, 10 mM EDTA, 2 mM sodium azide, 12 mM DMPC, 48 mM DHPC, 1 mM [U-98% 13C; U-98% 15N] protein100% D2O205.0ambient313
33D HNCO1 mM protein, 10 mM EDTA, 2 mM sodium azide, 12 mM DMPC, 48 mM DHPC, 1 mM [U-98% 13C; U-98% 15N] protein90% H2O/10% D2O205.0ambient313
43D HNCA1 mM protein, 10 mM EDTA, 2 mM sodium azide, 12 mM DMPC, 48 mM DHPC, 1 mM [U-98% 13C; U-98% 15N] protein90% H2O/10% D2O205.0ambient313
53D HN(CO)CA1 mM protein, 10 mM EDTA, 2 mM sodium azide, 12 mM DMPC, 48 mM DHPC, 1 mM [U-98% 13C; U-98% 15N] protein90% H2O/10% D2O205.0ambient313
62D 1H-1H NOESY2 mM [U-98% 15N] protein, 10 mM EDTA, 2 mM sodium azide, 12 mM DMPC, 48 mM DHPC90% H2O/10% D2O205.0ambient313
73D 1H-15N NOESY2 mM [U-98% 15N] protein, 10 mM EDTA, 2 mM sodium azide, 12 mM DMPC, 48 mM DHPC90% H2O/10% D2O205.0ambient313
83D HCCH-TOCSY1 mM protein, 10 mM EDTA, 2 mM sodium azide, 12 mM DMPC, 48 mM DHPC, 1 mM [U-98% 13C; U-98% 15N] protein100% D2O205.0ambient313
93D 1H-13C NOESY1 mM protein, 10 mM EDTA, 2 mM sodium azide, 12 mM DMPC, 48 mM DHPC, 1 mM [U-98% 13C; U-98% 15N] protein100% D2O205.0ambient313
103D 13C-filt. NOESY1 mM protein, 10 mM EDTA, 2 mM sodium azide, 12 mM DMPC, 48 mM DHPC, 1 mM [U-98% 13C; U-98% 15N] protein100% D2O205.0ambient313
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2VarianUNITY600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCYANA
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
2chemical shift assignmentCARA1.8.3Keller and Wuthrich
3data analysisCARA1.8.3Keller and Wuthrich
4refinementCYANA2.1Guntert, Mumenthaler and Wuthrich