2L1L

NMR Solution Structure of the Phi0 PKI NES Peptide in Complex with CRM1-RanGTP


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N CRINEPT200 uM [U-13C; U-15N; U-2H; ILV-1H] Phi0 PKI-NES-1, 200 uM [U-13C; U-15N; U-2H; ILV-1H, Ala-1H/12C/14N] Phi0 PKI-NES-290% H2O/10% D2O506.8ambient298
22D 1H-13C HMQC200 uM [U-13C; U-15N; U-2H; ILV-1H] Phi0 PKI-NES-1, 200 uM [U-13C; U-15N; U-2H; ILV-1H, Ala-1H/12C/14N] Phi0 PKI-NES-290% H2O/10% D2O506.8ambient298
33D 13C ed NOESY-HMQC200 uM [U-13C; U-15N; U-2H; ILV-1H] Phi0 PKI-NES-1, 200 uM [U-13C; U-15N; U-2H; ILV-1H, Ala-1H/12C/14N] Phi0 PKI-NES-290% H2O/10% D2O506.8ambient298
43D 15C ed NOESY-HMQC200 uM [U-13C; U-15N; U-2H; ILV-1H] Phi0 PKI-NES-1, 200 uM [U-13C; U-15N; U-2H; ILV-1H, Ala-1H/12C/14N] Phi0 PKI-NES-290% H2O/10% D2O506.8ambient298
52D 13C-13C TOCSY200 uM [U-13C; U-15N; U-2H; ILV-1H] Phi0 PKI-NES-1, 200 uM [U-13C; U-15N; U-2H; ILV-1H, Ala-1H/12C/14N] Phi0 PKI-NES-290% H2O/10% D2O506.8ambient298
62D 13C-13C NOESY200 uM [U-13C; U-15N; U-2H; ILV-1H] Phi0 PKI-NES-1, 200 uM [U-13C; U-15N; U-2H; ILV-1H, Ala-1H/12C/14N] Phi0 PKI-NES-290% H2O/10% D2O506.8ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE900
2BrukerAVANCE850
NMR Refinement
MethodDetailsSoftware
simulated annealingSparky
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number1000
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionSparkyGoddard
2chemical shift assignmentSparkyGoddard
3data analysisSparkyGoddard
4geometry optimizationARIA1.2Linge, O'Donoghue and Nilges
5geometry optimizationCNSBrunger, Adams, Clore, Gros, Nilges and Read
6peak pickingSparkyGoddard
7processingNMRPipeCornilescu, Delaglio and Bax
8collectionTopSpinBruker Biospin
9refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read