2KV1

Insights into Function, Catalytic Mechanism and Fold Evolution of Mouse Selenoprotein Methionine Sulfoxide Reductase B1 through Structural Analysis


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-15N NOESY1-1.5mM [U-98% 13C; U-98% 15N] MsrB1-1, 10mM sodium chloride-2, 20mM sodium phosphate-3, 5mM DTT-490% H2O/10% D2O0.065.5ambient298
23D 1H-13C NOESY1-1.5mM [U-98% 13C; U-98% 15N] MsrB1-5, 10mM sodium chloride-6, 20mM sodium phosphate-7, 5mM DTT-8100% D2O0.065.5ambient298
33D 1H-13C NOESY1-1.5mM [U-98% 13C; U-98% 15N] MsrB1-5, 10mM sodium chloride-6, 20mM sodium phosphate-7, 5mM DTT-8100% D2O0.065.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance800
2BrukerAvance600
NMR Refinement
MethodDetailsSoftware
simulated annealingxwinnmr
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number96
Conformers Submitted Total Number20
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionxwinnmr3.5Bruker Biospin
2processingxwinnmr3.5Bruker Biospin
3data analysisXEASYBartels et al.
4structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
5geometry optimizationAMBER10Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm
6refinementCYANA2.1Guntert, Mumenthaler and Wuthrich