2KMO

Solution structure of native Leech-derived tryptase inhibitor, LDTI


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H TOCSY1.7 mM LDTI90% H2O/10% D2O1.7ambient298
22D 1H-1H COSY1.7 mM LDTI90% H2O/10% D2O1.7ambient298
32D 1H-1H NOESY1.7 mM LDTI90% H2O/10% D2O1.7ambient298
42D 1H-1H TOCSY1.7 mM LDTI100% D2O1.7ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance800
2BrukerAvance600
NMR Refinement
MethodDetailsSoftware
molecular dynamicsenergy minimization with NMR distance constraints using a generalized Born solvent modelTOPSPIN
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number50
Conformers Submitted Total Number20
Representative Model1 (fewest violations)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionTOPSPIN1.3Bruker Biospin
2processingTOPSPIN1.3Bruker Biospin
3peak pickingNMRView5.0.20Johnson, One Moon Scientific
4data analysisNMRView5.0.20Johnson, One Moon Scientific
5structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
6refinementAMBER9.0Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollm