2KMD
Ras signaling requires dynamic properties of Ets1 for phosphorylation-enhanced binding to co-activator CBP
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1 mM [U-100% 13C; U-100% 15N] 2P-ETS1PNT | 90% H2O/10% D2O | 20 | 6.5 | ambient | 303 | |
2 | 2D 1H-13C HSQC | 1 mM [U-100% 13C; U-100% 15N] 2P-ETS1PNT | 90% H2O/10% D2O | 20 | 6.5 | ambient | 303 | |
3 | 3D HNCACB | 1 mM [U-100% 13C; U-100% 15N] 2P-ETS1PNT | 90% H2O/10% D2O | 20 | 6.5 | ambient | 303 | |
4 | 3D HCCH-TOCSY | 1 mM [U-100% 13C; U-100% 15N] 2P-ETS1PNT | 90% H2O/10% D2O | 20 | 6.5 | ambient | 303 | |
5 | 3D 1H-15N NOESY | 1 mM [U-100% 13C; U-100% 15N] 2P-ETS1PNT | 90% H2O/10% D2O | 20 | 6.5 | ambient | 303 | |
6 | 3D 1H-15N TOCSY | 1 mM [U-100% 13C; U-100% 15N] 2P-ETS1PNT | 90% H2O/10% D2O | 20 | 6.5 | ambient | 303 | |
7 | 3D 1H-13C NOESY | 1 mM [U-100% 13C; U-100% 15N] 2P-ETS1PNT | 90% H2O/10% D2O | 20 | 6.5 | ambient | 303 | |
8 | 3D CBCA(CO)NH | 1 mM [U-100% 13C; U-100% 15N] 2P-ETS1PNT | 90% H2O/10% D2O | 20 | 6.5 | ambient | 303 | |
9 | IPAP | 1 mM [U-100% 13C; U-100% 15N] 2P-ETS1PNT | 90% H2O/10% D2O | 20 | 6.5 | ambient | 303 | |
10 | CLEANEX | 1 mM [U-100% 13C; U-100% 15N] 2P-ETS1PNT | 90% H2O/10% D2O | 20 | 6.5 | ambient | 303 | |
11 | T1_T2_HNNOE | 1 mM [U-100% 13C; U-100% 15N] 2P-ETS1PNT | 90% H2O/10% D2O | 20 | 6.5 | ambient | 303 | |
12 | HNCOCA_HACA | 1 mM [U-100% 13C; U-100% 15N] 2P-ETS1PNT | 90% H2O/10% D2O | 20 | 6.5 | ambient | 303 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | CYANA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 500 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | CYANA | Guntert, P. et al. | |
2 | refinement | SCULPTOR | (SCULPTOR)-Martin Blackledge | |
3 | chemical shift assignment | SPARKY | Goddard, T. et al. | |
4 | processing | NMRDraw | Delaglio, F. et al. | |
5 | data analysis | Molmol | Koradi, R. et al. | |
6 | data analysis | ProcheckNMR | Laskowski, R. et al. | |
7 | collection | VNMR | Varian | |
8 | data analysis | TALOS | Cornilescu, G. et al. |