2KIG
A PH domain within OCRL bridges clathrin mediated membrane trafficking to phosphoinositide metabolism
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
2 | 3D HNCO | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
3 | 3D HNCA | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
4 | 3D CBCA(CO)NH | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
5 | 3D C(CO)NH | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
6 | 3D HN(CO)CA | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
7 | 3D H(CCO)NH | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
8 | 3D HCCH-TOCSY | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
9 | 3D 1H-15N NOESY | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 | ||
10 | 3D 1H-13C NOESY | 20 mM potassium phosphate-1 | potasium phosphate | 6.4 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | NMRDraw |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 200 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | NMRDraw | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
2 | peak picking | Sparky | Goddard | |
3 | refinement | X-PLOR NIH | Schwieters, Kuszewski, Tjandra and Clore |