2K6T

Solution structure of the relaxin-like factor


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D DQF-COSY1.2 mM RLF; D2O sodium acetate, 1.2 mM RLF; D2O100% D2O288
22D DQF-COSY1.2 mM RLF; D2O sodium acetate, 1.2 mM RLF; D2O100% D2O308
32D DQF-COSY0.1 mM RLF; H2O sodium acetate, 0.2 mM RLF; H2O sodium acetate, 0.3 mM RLF; H2O sodium acetate, 0.6 mM RLF; H2O sodium acetate, 1.2 mM RLF; H2O sodium acetate92% H2O/8% D2O5.0308
42D 1H-1H TOCSY1.2 mM RLF; D2O sodium acetate, 1.2 mM RLF; D2O100% D2O308
52D 1H-1H TOCSY0.1 mM RLF; H2O sodium acetate, 0.2 mM RLF; H2O sodium acetate, 0.3 mM RLF; H2O sodium acetate, 0.6 mM RLF; H2O sodium acetate, 1.2 mM RLF; H2O sodium acetate92% H2O/8% D2O5.0308
62D 1H-13C HSQC1.2 mM RLF; D2O sodium acetate, 1.2 mM RLF; D2O100% D2O308
72D 1H-1H NOESY1.2 mM RLF; D2O sodium acetate, 1.2 mM RLF; D2O100% D2O288
82D 1H-1H NOESY1.2 mM RLF; D2O sodium acetate, 1.2 mM RLF; D2O100% D2O308
92D 1H-1H NOESY0.1 mM RLF; H2O sodium acetate, 0.2 mM RLF; H2O sodium acetate, 0.3 mM RLF; H2O sodium acetate, 0.6 mM RLF; H2O sodium acetate, 1.2 mM RLF; H2O sodium acetate92% H2O/8% D2O5.0293
102D 1H-1H NOESY0.1 mM RLF; H2O sodium acetate, 0.2 mM RLF; H2O sodium acetate, 0.3 mM RLF; H2O sodium acetate, 0.6 mM RLF; H2O sodium acetate, 1.2 mM RLF; H2O sodium acetate92% H2O/8% D2O5.0296
112D 1H-1H NOESY0.1 mM RLF; H2O sodium acetate, 0.2 mM RLF; H2O sodium acetate, 0.3 mM RLF; H2O sodium acetate, 0.6 mM RLF; H2O sodium acetate, 1.2 mM RLF; H2O sodium acetate92% H2O/8% D2O5.0301
122D 1H-1H NOESY0.1 mM RLF; H2O sodium acetate, 0.2 mM RLF; H2O sodium acetate, 0.3 mM RLF; H2O sodium acetate, 0.6 mM RLF; H2O sodium acetate, 1.2 mM RLF; H2O sodium acetate92% H2O/8% D2O5.0303
132D 1H-1H NOESY0.1 mM RLF; H2O sodium acetate, 0.2 mM RLF; H2O sodium acetate, 0.3 mM RLF; H2O sodium acetate, 0.6 mM RLF; H2O sodium acetate, 1.2 mM RLF; H2O sodium acetate92% H2O/8% D2O5.0306
142D 1H-1H NOESY0.1 mM RLF; H2O sodium acetate, 0.2 mM RLF; H2O sodium acetate, 0.3 mM RLF; H2O sodium acetate, 0.6 mM RLF; H2O sodium acetate, 1.2 mM RLF; H2O sodium acetate92% H2O/8% D2O5.0308
152D 1H-1H NOESY0.1 mM RLF; H2O sodium acetate, 0.2 mM RLF; H2O sodium acetate, 0.3 mM RLF; H2O sodium acetate, 0.6 mM RLF; H2O sodium acetate, 1.2 mM RLF; H2O sodium acetate92% H2O/8% D2O5.0313
162D 1H-15N HSQC0.1 mM RLF; H2O sodium acetate, 0.2 mM RLF; H2O sodium acetate, 0.3 mM RLF; H2O sodium acetate, 0.6 mM RLF; H2O sodium acetate, 1.2 mM RLF; H2O sodium acetate92% H2O/8% D2O5.0308
172D 1H-13C HSQC1.2 mM RLF; D2O sodium acetate, 1.2 mM RLF; D2O100% D2O308
182D 1H-15N HSQC1.2 mM [U-15N] Gly(47), Gly(48), Ala(107), Ala(112), Gly(119) RLF; H2O sodium acetate, 0.6 mM [U-15N] Gly(47), Gly(48), Ala(107), Ala(112), Gly(119) RLF; H2O sodium acetate, 0.4 mM [U-15N] Gly(47), Gly(48), Ala(107), Ala(112), Gly(119) RLF; H2O sodium acetate, 0.2 mM [U-15N] Gly(47), Gly(48), Ala(107), Ala(112), Gly(119) RLF; H2O sodium acetate92% H2O/8% D2O5.0306
192D 1H-15N HSQC-NOESY1.2 mM [U-15N] Gly(47), Gly(48), Ala(107), Ala(112), Gly(119) RLF; H2O sodium acetate, 0.6 mM [U-15N] Gly(47), Gly(48), Ala(107), Ala(112), Gly(119) RLF; H2O sodium acetate, 0.4 mM [U-15N] Gly(47), Gly(48), Ala(107), Ala(112), Gly(119) RLF; H2O sodium acetate, 0.2 mM [U-15N] Gly(47), Gly(48), Ala(107), Ala(112), Gly(119) RLF; H2O sodium acetate92% H2O/8% D2O5.0306
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA800
2VarianINOVA500
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
Detailsstructure was determined using homonuclear NOE
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCNS1.1Brunger, Adams, Clore, Gros, Nilges and Read
2refinementCNS1.1Brunger, Adams, Clore, Gros, Nilges and Read
3refinementARIA2.1Linge, O'Donoghue and Nilges
4noe assignmentARIA2.1Linge, O'Donoghue and Nilges
5structure solutionARIA2.1Linge, O'Donoghue and Nilges
6peak pickingSparky3.110Goddard
7chemical shift assignmentSparky3.110Goddard
8processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
9bond angle predictionPREDITORWishart