2K33

Solution structure of an N-glycosylated protein using in vitro glycosylation


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1 mM [U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate95% H2O/5% D2O506.4ambient303
22D 1H-15N HSQC1 mM [U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate100% D2O506.4ambient303
32D 1H-13C HSQC1 mM [U-100% 13C; U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate95% H2O/5% D2O506.4ambient303
42D 1H-13C HSQC1 mM [U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate95% H2O/5% D2O506.4ambient303
52D 1H-1H NOESY1 mM [U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate95% H2O/5% D2O506.4ambient303
62D 1H-1H NOESY1 mM [U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate100% D2O506.4ambient303
73D CBCA(CO)NH1 mM [U-100% 13C; U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate95% H2O/5% D2O506.4ambient303
83D HNCA1 mM [U-100% 13C; U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate95% H2O/5% D2O506.4ambient303
93D HN(CO)CA1 mM [U-100% 13C; U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate95% H2O/5% D2O506.4ambient303
103D HCCH-TOCSY1 mM [U-100% 13C; U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate100% D2O506.4ambient303
113D 1H-13C NOESY1 mM [U-100% 13C; U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate95% H2O/5% D2O506.4ambient303
123D 1H-15N NOESY1 mM [U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate95% H2O/5% D2O506.4ambient303
132D 13C filtered-filtered NOESY1 mM [U-100% 13C; U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate100% D2O506.4ambient303
142D 15N filtered-filtered NOESY1 mM [U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate95% H2O/5% D2O506.4ambient303
153D 13C edited-filtered NOESY1 mM [U-100% 13C; U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate100% D2O506.4ambient303
162D 13C filtered-edited NOESY1 mM [U-100% 13C; U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate100% D2O506.4ambient303
172D 1H-13C HSQC1 mM [U-100% 13C; U-100% 15N] AcrA, 1 mM SUGAR (7-MER), 50 mM potassium phosphate100% D2O506.4ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE500
2BrukerAVANCE600
3BrukerAVANCE750
4BrukerAVANCE900
NMR Refinement
MethodDetailsSoftware
distance geometryTopSpin
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number1000
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingTopSpin2.0Bruker Biospin
2chemical shift assignmentSparkyGoddard
3refinementCYANAGuntert, Mumenthaler and Wuthrich