2K0L

NMR structure of the transmembrane domain of the Outer Membrane Protein A from Klebsiella pneumoniae in DHPC micelles.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D [15N,1H]-TROSY1 mM [U-13C; U-15N; U-2H] KpOmpA transmembrane domain90% H2O/10% D2O0.16.5ambient313
23D [15N,1H]-TROSY-HNCACB1 mM [U-13C; U-15N; U-2H] KpOmpA transmembrane domain90% H2O/10% D2O0.16.5ambient313
33D [15N,1H]-TROSY-HN(CO)CACB1 mM [U-13C; U-15N; U-2H] KpOmpA transmembrane domain90% H2O/10% D2O0.16.5ambient313
43D [15N,1H]-TROSY-HNCO1 mM [U-13C; U-15N; U-2H] KpOmpA transmembrane domain90% H2O/10% D2O0.16.5ambient313
53D [15N,1H]-TROSY-HN(CA)CO1 mM [U-13C; U-15N; U-2H] KpOmpA transmembrane domain90% H2O/10% D2O0.16.5ambient313
63D (HNCA)CC-TOCSY-(CA)-[15N,1H]-TROSY1 mM [U-13C; U-15N; U-2H] KpOmpA transmembrane domain90% H2O/10% D2O0.16.5ambient313
73D (H)C(CC)-TOCSY-(CA)-[15N,1H]-TROSY1 mM [U-13C; U-15N; U-2H]/[L,V,I(delta1)-13CH3] KpOmpA transmembrane domain90% H2O/10% D2O0.16.5ambient313
83D H(CCCO)-TOCSY1 mM [U-13C; U-15N; U-2H]/[L,V,I(delta1)-13CH3] KpOmpA transmembrane domain90% H2O/10% D2O0.16.5ambient313
92D [1H,13C]-CT-HSQC1 mM [U-15N;10%-13C] KpOmpA transmembrane domain90% H2O/10% D2O0.16.5ambient313
104D 15N,15N-separated HMQC-NOESY-TROSY1 mM [U-13C; U-15N; U-2H] KpOmpA transmembrane domain90% H2O/10% D2O0.16.5ambient313
113D 15N,13C-separated HMQC-NOESY-TROSY1 mM [U-13C; U-15N; U-2H]/[L,V,I(delta1)-13CH3] KpOmpA transmembrane domain90% H2O/10% D2O0.16.5ambient313
123D 13C,13C-separated HMQC-NOESY1 mM [U-13C; U-15N; U-2H]/[L,V,I(delta1)-13CH3] KpOmpA transmembrane domain90% H2O/10% D2O0.16.5ambient313
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE900
2BrukerAVANCE800
3BrukerAVANCE700
4BrukerAVANCE600
5BrukerAVANCE500
NMR Refinement
MethodDetailsSoftware
DGSA-distance geometry simulated annealing, simulated annealing, torsion angle dynamicsNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2data analysisNMRViewv5.2.2Johnson, One Moon Scientific
3refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read