2JZA

Solution NMR structure of nitrite reductase [NAD(P)H] small subunit from Erwinia carotovora. Northeast Structural Genomics Consortium target EwR120


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.32 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
23D HNCO0.32 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
33D HNCACB0.32 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
43D HNCA0.32 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
53D CBCA(CO)NH0.32 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
63D 1H-15N,13Cali,13Caro NOESY0.7 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
72D 1H-15N HSQC0.7 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
82D 1H-13C HSQC ali0.7 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
93D HCCH-COSY aliphatic0.7 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
103D HCCH-TOCSY aliphatic0.7 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
113D HBHA(CO)NH0.7 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
122D 1H-13C HSQC aromatic0.7 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
132D 1H-13C CT-HSQC aliphatic0.7 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
142D 1H-13C CT-HSQC aromatic0.7 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
153D HCCH-COSY aromatic0.7 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
162D 1Haro-15Naro LR-HSQC0.7 mM [U-100% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
172D 1H-13C CT-HSQC 28ms0.24 mM [U-5% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
182D 1H-13C CT-HSQC 56ms0.24 mM [U-5% 13C; U-100% 15N] ewr120 protein, 5 mM calcium chloride, 20 mM ammonium acetate, 100 mM sodium chloride, 10 mM DTT, 0.02 % sodium azide95% H2O/5% D2O1385.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
2VarianINOVA750
NMR Refinement
MethodDetailsSoftware
simulated annealingIn explicit water bathAutoStructure
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionAutoStructure2.0.0Huang, Tejero, Powers and Montelione
2data analysisCARA1.8.4Keller and Wuthrich
3peak pickingCARA1.8.4Keller and Wuthrich
4refinementCARA1.8.4Keller and Wuthrich
5chemical shift assignmentCARA1.8.4Keller and Wuthrich
6data analysisCSI2.0Wishart and Sykes
7refinementCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
8visualizationMOLMOL2K.2Koradi, Billeter and Wuthrich
9processingPROSA6.0.2Guntert
10data analysisTALOS98.040.21.02Cornilescu, Delaglio and Bax
11collectionVnmrJ2.1BVarian
12structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
13chemical shift assignmentAutoAssign1.15.1Zimmerman, Moseley, Kulikowski and Montelione
14collectionTopSpin1.4Bruker Biospin
15processingTopSpin1.4Bruker Biospin