X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.52950.2M Calcium Chloride, 0.25M Sodium Chloride,0.1M HEPES, 14% v/v PEG 400, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystal Properties
Matthews coefficientSolvent content
2.9858.7

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 99.607α = 90
b = 99.607β = 90
c = 160.234γ = 120
Symmetry
Space GroupP 61

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDSBC-3Mirrors2005-07-20MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-BM0.97874APS19-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.83095.40.13917.8710.22121821218-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.82.972.40.4164.197.61608

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.83020089109495.370.170340.16710.22977RANDOM35.535
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.090.551.09-1.64
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.742
r_dihedral_angle_3_deg16.547
r_dihedral_angle_4_deg14.425
r_dihedral_angle_1_deg5.835
r_scangle_it3.522
r_scbond_it2.219
r_mcangle_it1.546
r_angle_refined_deg1.196
r_mcbond_it1.116
r_nbtor_refined0.329
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.742
r_dihedral_angle_3_deg16.547
r_dihedral_angle_4_deg14.425
r_dihedral_angle_1_deg5.835
r_scangle_it3.522
r_scbond_it2.219
r_mcangle_it1.546
r_angle_refined_deg1.196
r_mcbond_it1.116
r_nbtor_refined0.329
r_nbd_refined0.236
r_xyhbond_nbd_refined0.215
r_symmetry_hbond_refined0.213
r_symmetry_metal_ion_refined0.211
r_symmetry_vdw_refined0.197
r_metal_ion_refined0.137
r_chiral_restr0.077
r_bond_refined_d0.01
r_gen_planes_refined0.003
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4856
Nucleic Acid Atoms
Solvent Atoms193
Heterogen Atoms12

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
SHARPphasing