X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.2946.3

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 92.487α = 90
b = 92.487β = 90
c = 127.529γ = 120
Symmetry
Space GroupP 61 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2005-01-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X122.00EMBL/DESY, HAMBURGX12

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.983023075

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT1.98302260447199.920.190610.189670.23732RANDOM36.694
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.4-0.2-0.40.6
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.766
r_dihedral_angle_4_deg16.003
r_dihedral_angle_3_deg12.921
r_scangle_it6.32
r_dihedral_angle_1_deg6.047
r_scbond_it4.766
r_mcangle_it2.212
r_angle_refined_deg1.896
r_mcbond_it1.508
r_angle_other_deg0.972
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg30.766
r_dihedral_angle_4_deg16.003
r_dihedral_angle_3_deg12.921
r_scangle_it6.32
r_dihedral_angle_1_deg6.047
r_scbond_it4.766
r_mcangle_it2.212
r_angle_refined_deg1.896
r_mcbond_it1.508
r_angle_other_deg0.972
r_mcbond_other0.394
r_nbd_refined0.228
r_symmetry_vdw_other0.215
r_nbtor_refined0.191
r_nbd_other0.179
r_symmetry_hbond_refined0.143
r_xyhbond_nbd_refined0.131
r_chiral_restr0.129
r_symmetry_vdw_refined0.112
r_metal_ion_refined0.109
r_nbtor_other0.089
r_bond_refined_d0.025
r_gen_planes_refined0.01
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2437
Nucleic Acid Atoms
Solvent Atoms92
Heterogen Atoms17

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
CCP4data scaling
FFTphasing