2A55

Solution structure of the two N-terminal CCP modules of C4b-binding protein (C4BP) alpha-chain.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY2.5 mM C4BP12 U-13C, 15N, 20 mM sodium acetate buffer, pH 4.5, 90% H2O, 10% D2O90% H2O/10% D2O20 mM sodium acetate buffer4.51 atm310
23D_15N-separated_NOESY2.5 mM C4BP12 U-13C, 15N, 20 mM sodium acetate buffer, pH 4.5, 90% H2O, 10% D2O90% H2O/10% D2O20 mM sodium acetate buffer4.51 atm310
3NH-IPAP 15N HSQC0.70 mM C4BP12 U-13C, 15N, 7.3 mg/ml Pf1 phage, 20 mM sodium acetate buffer, pH 5.5, 90 mM NaCl, 90% H2O, 10% D2O90% H2O/10% D2O20 mM sodium acetate buffer, 90 mM NaCl5.51 atm310
4NC-HN(a/b-NC'-J)0.70 mM C4BP12 U-13C, 15N, 7.3 mg/ml Pf1 phage, 20 mM sodium acetate buffer, pH 5.5, 90 mM NaCl, 90% H2O, 10% D2O90% H2O/10% D2O20 mM sodium acetate buffer, 90 mM NaCl5.51 atm310
5CC-HN(a/b-COCA-J)0.70 mM C4BP12 U-13C, 15N, 7.3 mg/ml Pf1 phage, 20 mM sodium acetate buffer, pH 5.5, 90 mM NaCl, 90% H2O, 10% D2O90% H2O/10% D2O20 mM sodium acetate buffer, 90 mM NaCl5.51 atm310
6CaHa-2D J-(HNCO)CANH0.70 mM C4BP12 U-13C, 15N, 7.3 mg/ml Pf1 phage, 20 mM sodium acetate buffer, pH 5.5, 90 mM NaCl, 90% H2O, 10% D2O90% H2O/10% D2O20 mM sodium acetate buffer, 90 mM NaCl5.51 atm310
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
2BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
molecular dynamics simulated annealingthe structures are based on 3032 NOE-derived distance restraints and 219 RDC restraintsCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number40
Representative Model1 (closest to the average)
Additional NMR Experimental Information
DetailsAll RDC experiments (i.e. NH-IPAP 15N HSQC,, NC-HN(a/b-NC'-J), CC-HN(a/b-COCA-J), CaHa-2D J-(HNCO)CANH were recorded twice, once in aligned media (Solution Id 2) and once in unaligned media (solution Id 1)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCNS1.1Brunger
2processingAzara2.7Boucher
3data analysisANSIG3.3Kraulis
4refinementCNS1.1Brunger