1UU4

X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMICOLA GRISEA CEL12A IN COMPLEX WITH CELLOBIOSE


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
13.1CRYSTALS GREW FROM A PROTEIN STOCK SOLUTION CONTAINING 1MG/ML PROTEIN IN 0.05 M BIS TRIS PROPANE AND 0.05 M AMMONIUM ACETATE, PH 8 CRYSTALS WERE CRYOPROTECTED IN UNBUFFERED 50% MME PEG 2000
Crystal Properties
Matthews coefficientSolvent content
1.830.6

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 49.309α = 90
b = 49.309β = 90
c = 166.15γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC CCD2001-10-05MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-1ESRFID14-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.49147.1499.80.1217.69.134605
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.491.5299.60.3774.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONOTHERTHROUGHOUT1.4942.263344210891000.1530.1520.161RANDOM10.18
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.330.33-0.65
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.976
r_angle_other_deg3.785
r_scangle_it2.453
r_scbond_it1.571
r_angle_refined_deg1.257
r_mcangle_it1.048
r_mcbond_it0.543
r_symmetry_vdw_other0.312
r_nbd_other0.278
r_nbd_refined0.179
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg6.976
r_angle_other_deg3.785
r_scangle_it2.453
r_scbond_it1.571
r_angle_refined_deg1.257
r_mcangle_it1.048
r_mcbond_it0.543
r_symmetry_vdw_other0.312
r_nbd_other0.278
r_nbd_refined0.179
r_symmetry_vdw_refined0.158
r_symmetry_hbond_refined0.131
r_nbtor_other0.112
r_xyhbond_nbd_refined0.091
r_chiral_restr0.082
r_bond_refined_d0.007
r_gen_planes_other0.007
r_gen_planes_refined0.005
r_bond_other_d
r_dihedral_angle_2_deg
r_dihedral_angle_3_deg
r_dihedral_angle_4_deg
r_nbtor_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1832
Nucleic Acid Atoms
Solvent Atoms211
Heterogen Atoms36

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling