1SGW

Putative ABC transporter (ATP-binding protein) from Pyrococcus furiosus Pfu-867808-001


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1modified microbatch7.929115% PEG-4000, 10% isopropanol, 10% glycerol, 100mM TRIS, pH 7.9, modified microbatch, temperature 291K
Crystal Properties
Matthews coefficientSolvent content
2.2946.38

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 44.982α = 90
b = 67.583β = 90
c = 72.768γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2003-10-25MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 22-ID1.066APS22-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.73099.40.04112373623651-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.71.7698.50.123

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.73023651126899.270.19680.195380.22299RANDOM19.326
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.46-0.190.65
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg4.867
r_scangle_it4.61
r_mcangle_it3.296
r_scbond_it2.916
r_mcbond_it2.134
r_angle_refined_deg1.294
r_nbtor_refined0.309
r_nbd_refined0.198
r_symmetry_vdw_refined0.132
r_xyhbond_nbd_refined0.106
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg4.867
r_scangle_it4.61
r_mcangle_it3.296
r_scbond_it2.916
r_mcbond_it2.134
r_angle_refined_deg1.294
r_nbtor_refined0.309
r_nbd_refined0.198
r_symmetry_vdw_refined0.132
r_xyhbond_nbd_refined0.106
r_chiral_restr0.086
r_symmetry_hbond_refined0.082
r_bond_refined_d0.011
r_gen_planes_refined0.005
r_bond_other_d
r_angle_other_deg
r_dihedral_angle_2_deg
r_dihedral_angle_3_deg
r_dihedral_angle_4_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1520
Nucleic Acid Atoms
Solvent Atoms96
Heterogen Atoms3

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
SOLVEphasing
MLPHAREphasing
ARP/wARPmodel building
REFMACrefinement
MAR345data collection