1RK9

Solution Structure of Human alpha-Parvalbumin (Minimized Average Structure)


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY1.5 mM Parvalbumin U-15N,13C; 100mM NaCl; 90% H2O, 10% D2O; pH 7.0; for CaCaPV90% H2O/10% D2O100 mM NaCl7.0ambient298
23D_13C-separated_NOESY1.5 mM Parvalbumin U-15N,13C; 100mM NaCl; 90% H2O, 10% D2O; pH 7.0; for CaCaPV90% H2O/10% D2O100 mM NaCl7.0ambient298
32D NOESY1.5 mM Parvalbumin U-15N,13C; 100mM NaCl; 90% H2O, 10% D2O; pH 7.0; for CaCaPV90% H2O/10% D2O100 mM NaCl7.0ambient298
42D TOCSY1.5 mM Parvalbumin U-15N,13C; 100mM NaCl; 90% H2O, 10% D2O; pH 7.0; for CaCaPV90% H2O/10% D2O100 mM NaCl7.0ambient298
5HNHA1.5 mM Parvalbumin U-15N,13C; 100mM NaCl; 90% H2O, 10% D2O; pH 7.0; for CaCaPV90% H2O/10% D2O100 mM NaCl7.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE700
2BrukerAVANCE600
3BrukerAVANCE500
NMR Refinement
MethodDetailsSoftware
distance geometry; simulated annealing; molecular dynamics; torsion angle dynamics pseudocontact shifts; residue diploar couplingsXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number20
Conformers Submitted Total Number1
Representative Model1 (minimized average structure)
Additional NMR Experimental Information
DetailsAll spectrometers are equipped with a triple resonance (TXI) 5 mm probe with a z-axis pulse field gradient, and the 500 MHz spectrometer is equipped with a triple resonance cryo-probe. This structure was determined using pseudocontact shifts and residue dipolar couplings with all diamagnetic restraints
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR3.1Brunger
2processingXwinNMR3.1Brunger
3data analysisXEASY1.3Guntert
4structure solutionDYANA1.5Guntert
5refinementAmber5.0Rearlman