1RG6
Solution structure of the C-terminal domain of p63
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 1H-1H-15N TOCSY, 3D 1H-1H-15N NOESY, 3D HNHA, 2D 1H-15N HSQC | 0.75mM p63 U-15N, 25mM sodium posphate, 150mM sodium chloride, 1mM AEBSF, 3mM DTT | 95% H20, 5%D2O | 150mM NaCl | 6 | ambient | 298 | |
2 | 3D HNCA, 3D HNCO, 3D CBCA(co)NH, 3D CBCANH, 3D HBHA(co)NH, H1 -C13 HSQC | 0.25mM p63 U-15N U-13C, 25mM sodium posphate, 150mM sodium chloride, 1mM AEBSF, 3mM DTT | 95% H20, 5%D2O | 150mM NaCl | 6 | ambient | 298 | |
3 | 3D HACACO, 3D hCCH TOCSY, 3D HcCH TOCSY, 3D HcCH COSY, 3D hCCH COSY, 3D C13, N15 edited NOESY | 0.25mM p63 U-15N U-13C, 25mM sodium posphate, 150mM sodium chloride, 1mM AEBSF, 3mM DTT | 100% D2O | 150mM NaCl | 6 | ambient | 298 | |
4 | 2D 1H-15N HSQC | 0.75mM p63 U-15N, 25mM sodium posphate, 150mM sodium chloride, 1mM AEBSF, 3mM DTT | phage | 150mM NaCl | 6 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 400 |
2 | Bruker | AVANCE | 750 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | the structures are based on NOE-derived distance constraints, dihedral angle restraints, distance restraints from hydrogen bonds, costant coupling constants and residual dipolar coupling | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 500 |
Conformers Submitted Total Number | 20 |
Representative Model | 19 (closest to the average) |
Additional NMR Experimental Information | |
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Details | The structure was determined using triple-resonance NMR spectroscopy and residual dipolar coupling experiment |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 3.0 | Bruker |
2 | processing | NMRPipe | 970271256 | Delaglio |
3 | structure solution | X-PLOR | 3.85 | Brunger |
4 | data analysis | NMRView | 5 | Johnson |
5 | refinement | X-PLOR | 3.85 | Brunger |