1PD7

Extended SID of Mad1 bound to the PAH2 domain of mSin3B


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_13C-separated_NOESY1.3 mM PAH2 U-15,13C; 1.3 mM SID 50 mM phosphate buffer pH 6.3 trace amounts of NaN3 and Pefabloc95% H20, 5% D2050 mM K2HPO4/KH2PO46.3ambient293
23D_15N-separated_NOESY1.3 mM PAH2 U-15,13C; 1.3 mM SID 50 mM phosphate buffer pH 6.3 trace amounts of NaN3 and Pefabloc95% H20, 5% D2050 mM K2HPO4/KH2PO46.3ambient293
32D X-filtered NOESY1.3 mM PAH2 U-15,13C; 1.3 mM SID 50 mM phosphate buffer pH 6.3 trace amounts of NaN3 and Pefabloc95% H20, 5% D2050 mM K2HPO4/KH2PO46.3ambient293
43D 13C-edited-13C-filtered HMQC-NOESY1.3 mM PAH2 U-15,13C; 1.3 mM SID 50 mM phosphate buffer pH 6.3 trace amounts of NaN3 and Pefabloc95% H20, 5% D2050 mM K2HPO4/KH2PO46.3ambient293
53D 15N-edited-15N-filtered HSQC-NOESY1.3 mM PAH2 U-15,13C; 1.3 mM SID 50 mM phosphate buffer pH 6.3 trace amounts of NaN3 and Pefabloc95% H20, 5% D2050 mM K2HPO4/KH2PO46.3ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA500
2VarianINOVA600
3VarianINOVA750
4VarianINOVA800
NMR Refinement
MethodDetailsSoftware
simulated annealing, ITERATIVE NOE-ASSIGNMENTNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number30
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsA collection of PDB files, compiled by NMR_REFINE
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe2002Delaglio
2data analysisXEASY1.3.9Bartels
3structure solutionX-PLOR3.581Brunger
4refinementX-PLOR3.581Brunger