X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP9.529330% PEG 3000, 100mM 2-(cyclohexylamino)ethanesulfonic acid (CHES), pH 9.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.1643

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 44.664α = 90
b = 51.176β = 90
c = 108.253γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100 MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID290.9792ESRFID29

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.119.480.0770.07713.441482928.1
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.12.140.1944.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1ENH2.154.23148621409273798.30.201560.19970.23963RANDOM16.742
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg13.536
r_scangle_it5.825
r_mcangle_it3.844
r_scbond_it3.771
r_dihedral_angle_1_deg3.168
r_mcbond_it2.452
r_angle_refined_deg1.289
r_angle_other_deg0.686
r_xyhbond_nbd_refined0.301
r_symmetry_hbond_refined0.285
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg13.536
r_scangle_it5.825
r_mcangle_it3.844
r_scbond_it3.771
r_dihedral_angle_1_deg3.168
r_mcbond_it2.452
r_angle_refined_deg1.289
r_angle_other_deg0.686
r_xyhbond_nbd_refined0.301
r_symmetry_hbond_refined0.285
r_nbd_refined0.23
r_symmetry_vdw_other0.203
r_symmetry_vdw_refined0.194
r_nbd_other0.187
r_chiral_restr0.081
r_symmetry_hbond_other0.056
r_bond_refined_d0.011
r_gen_planes_refined0.004
r_gen_planes_other0.002
r_bond_other_d0.001
r_nbtor_other
r_xyhbond_nbd_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1721
Nucleic Acid Atoms
Solvent Atoms100
Heterogen Atoms13

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
EPMRphasing