1P6T

Structure characterization of the water soluble region of P-type ATPase CopA from Bacillus subtilis


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY1.5 mM apoS46VCopA, 20mM phosphate, 90%H2O, 10%D2O,2.0 mMDTT90% H2O/10% D2O20 mM phosphate + 2 mM DTT7.01 atm298
22D TOCSY1.5 mM apoS46VCopA, 20mM phosphate, 90%H2O, 10%D2O,2.0 mMDTT90% H2O/10% D2O20 mM phosphate + 2 mM DTT7.01 atm298
33D_13C-separated_NOESY1.5 mM apoS46VCopA, 20mM phosphate, 90%H2O, 10%D2O,2.0 mMDTT90% H2O/10% D2O20 mM phosphate + 2 mM DTT7.01 atm298
43D_15N-separated_NOESY1.5 mM apoS46VCopA, 20mM phosphate, 90%H2O, 10%D2O,2.0 mMDTT90% H2O/10% D2O20 mM phosphate + 2 mM DTT7.01 atm298
5HNHA1.5 mM apoS46VCopA, 20mM phosphate, 90%H2O, 10%D2O,2.0 mMDTT90% H2O/10% D2O20 mM phosphate + 2 mM DTT7.01 atm298
6HNHB1.5 mM apoS46VCopA, 20mM phosphate, 90%H2O, 10%D2O,2.0 mMDTT90% H2O/10% D2O20 mM phosphate + 2 mM DTT7.01 atm298
7CC(CO)NH1.5 mM apoS46VCopA, 20mM phosphate, 90%H2O, 10%D2O,2.0 mMDTT90% H2O/10% D2O20 mM phosphate + 2 mM DTT7.01 atm298
8(H)CCH-TOCSY1.5 mM apoS46VCopA, 20mM phosphate, 90%H2O, 10%D2O,2.0 mMDTT90% H2O/10% D2O20 mM phosphate + 2 mM DTT7.01 atm298
9CBCANH1.5 mM apoS46VCopA, 20mM phosphate, 90%H2O, 10%D2O,2.0 mMDTT90% H2O/10% D2O20 mM phosphate + 2 mM DTT7.01 atm298
10CBCA(CO)NH1.5 mM apoS46VCopA, 20mM phosphate, 90%H2O, 10%D2O,2.0 mMDTT90% H2O/10% D2O20 mM phosphate + 2 mM DTT7.01 atm298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
2BrukerAVANCE600
3BrukerAVANCE500
4BrukerAVANCE700
NMR Refinement
MethodDetailsSoftware
distance geometry, simulated annealing, molecular dynamics, torsion angle dynamics5099 NOE cross peaks were assigned and integrated, providing 4102 unique upper distance limits, of which 3303 are meaningful. 152 angle constraints, were experimentally determined and used in the calculations.XwinNMR
NMR Ensemble Information
Conformer Selection CriteriaThe submitted conformer models are the 30 structures with the lowest violations.
Conformers Calculated Total Number300
Conformers Submitted Total Number30
Representative Model1 (fewest violations)
Additional NMR Experimental Information
DetailsThe structure was determined using triple-resonance NMR spectroscopy.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingXwinNMR2.6BRUKER
2structure solutionDYANA1.5Gunter, Mumenthaler, Wuthrich
3structure solutionXEASY1.3Xia, Bartels
4refinementAmber5.0Pearlman, Case, Caldwell, Ross, Cheatham, Ferguson, Seibel, Singh, Weiner, Kollman